Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.220-201ENST00000364244 109 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 SNORA71.2-201ENST00000364941 134 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.341-201ENST00000365341 102 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.456-201ENST00000384232 111 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-813P-201ENST00000384691 107 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 AL603914.1-201ENST00000401964 204 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 RNU2-68P-201ENST00000410878 191 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 RNA5SP31-201ENST00000411144 127 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 SCARNA10-201ENST00000459255 330 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 AP005019.3-201ENST00000620418 560 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 MTND5P18-201ENST00000445624 1801 ntBASIC6.43□□□□□ -1.38
CCDC61Q9Y6R9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-942P-201ENST00000363002 107 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-727P-201ENST00000363592 107 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 SNORD45.3-201ENST00000363836 72 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-1336P-201ENST00000383886 109 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-1264P-201ENST00000383891 107 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 SNORA36A-201ENST00000384221 132 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 MIR659-201ENST00000384963 97 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 MIR29B2-201ENST00000385055 81 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 AC109327.1-201ENST00000471666 403 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.690-201ENST00000516603 95 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 AC006349.1-201ENST00000555526 235 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 MIR3138-201ENST00000585238 82 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 RPL30P11-203ENST00000598995 310 ntBASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC61Q9Y6R9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-1113P-201ENST00000384348 107 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 SNORA51.10-201ENST00000384418 136 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 RNU6-1152P-201ENST00000384576 107 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 Z98745.1-201ENST00000402553 494 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 Z85995.1-201ENST00000415547 335 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 CYP4A27P-201ENST00000567218 190 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 MIR3160-1-201ENST00000577972 85 ntBASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC61Q9Y6R9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AC025031.4-201ENST00000621248 3271 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 RNA5SP515-201ENST00000364570 118 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.544-201ENST00000384650 113 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 MIR320B2-201ENST00000408479 138 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 Y_RNA.622-201ENST00000411091 108 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AC099336.2-201ENST00000422457 254 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 RPL35AP21-201ENST00000437667 333 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AC099560.2-201ENST00000457554 255 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AC015795.1-201ENST00000513669 327 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 SCARNA15.2-201ENST00000516409 127 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 PRELID2P1-201ENST00000552837 301 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 MIR3939-201ENST00000582614 106 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 AC131055.1-201ENST00000584626 316 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 RNA5SP439-201ENST00000617595 124 ntBASIC6.4□□□□□ -1.38
CCDC61Q9Y6R9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC61Q9Y6R9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms