Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC104563.1-201ENST00000476147 376 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 MTCYBP35-201ENST00000503630 1137 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 AL137100.2-201ENST00000555786 315 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN4AP35499 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SCN4AP35499 AC245884.12-201ENST00000615364 59 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AC007671.2-201ENST00000637344 619 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SCN4AP35499 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SCN4AP35499 SMIM11P1-201ENST00000369586 178 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 Y_RNA.598-201ENST00000410480 95 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 RNU4-72P-201ENST00000410754 173 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 MTND3P17-201ENST00000416968 344 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AC098614.2-201ENST00000426040 255 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC244035.1-201ENST00000430042 390 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 RNU2-10P-201ENST00000516375 211 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 Y_RNA.689-201ENST00000516589 107 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 NACAP3-201ENST00000552100 481 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC005951.2-201ENST00000576282 495 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC093424.1-201ENST00000604999 338 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 MIR7844-201ENST00000616161 122 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 uc_338.12-201ENST00000616344 181 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AL607023.1-201ENST00000620045 248 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AC068057.2-201ENST00000624047 895 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC092104.1-201ENST00000497346 1441 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 RNU6-234P-201ENST00000365229 104 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
SCN4AP35499 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN4AP35499 RPS27AP14-201ENST00000422868 454 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 ZNF863P-201ENST00000426746 417 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AL354695.1-201ENST00000427935 228 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN4AP35499 AL117351.1-201ENST00000438864 766 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AC093899.1-201ENST00000457984 376 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN4AP35499 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN4AP35499 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN4AP35499 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN4AP35499 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN4AP35499 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.76□□□□□ -2.13
SCN4AP35499 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 MIR5697-201ENST00000578045 78 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 MIR151B-201ENST00000584249 96 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 BNIP3P9-201ENST00000603714 553 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AC004805.2-201ENST00000605382 482 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AC090970.3-201ENST00000612566 866 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AL449363.1-201ENST00000617815 186 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 AC008121.3-201ENST00000618726 433 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 MIR6767-201ENST00000637302 66 ntBASIC1.76□□□□□ -2.13
SCN4AP35499 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SCN4AP35499 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.75□□□□□ -2.13
SCN4AP35499 BPY2DP-201ENST00000422208 265 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MTND4P20-201ENST00000424125 869 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.75□□□□□ -2.13
SCN4AP35499 RPS25P9-201ENST00000435591 252 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 SNRPEP9-201ENST00000436794 238 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 GDI2P2-201ENST00000445131 608 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RPL23AP35-201ENST00000451906 501 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC087588.1-201ENST00000462203 316 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.75□□□□□ -2.13
SCN4AP35499 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.75□□□□□ -2.13
SCN4AP35499 AC116347.2-201ENST00000514912 523 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RNA5SP291-201ENST00000517222 105 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.75□□□□□ -2.13
SCN4AP35499 AC016957.1-201ENST00000534895 309 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC009094.1-201ENST00000564443 426 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MIR3118-1-201ENST00000581787 76 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC080078.3-201ENST00000605407 463 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MIR6078-201ENST00000611069 100 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.75□□□□□ -2.13
SCN4AP35499 AC009159.2-201ENST00000617603 606 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC079248.2-201ENST00000623779 326 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AL136313.1-201ENST00000624804 202 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC008669.1-201ENST00000565823 2178 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SCN4AP35499 RNU1-22P-201ENST00000363334 158 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
SCN4AP35499 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SCN4AP35499 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SCN4AP35499 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.75□□□□□ -2.13
SCN4AP35499 NDUFB4P7-201ENST00000423198 363 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 HMGB1P9-201ENST00000429856 646 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RSU1P2-202ENST00000437884 485 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AL714022.1-201ENST00000439897 151 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MTND1P26-201ENST00000440488 538 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MTND3P7-201ENST00000474435 343 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC116337.2-201ENST00000477662 156 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RPL30P5-201ENST00000494923 336 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms