Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC130454.1-201ENST00000622948 401 ntBASIC4.81□□□□□ -1.64
TMEM88BA6NKF7 SCARNA4-201ENST00000629045 128 ntBASIC4.81□□□□□ -1.64
TMEM88BA6NKF7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.81□□□□□ -1.64
TMEM88BA6NKF7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TMEM88BA6NKF7 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
TMEM88BA6NKF7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 HAUS6P2-201ENST00000433254 2404 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 SNORD56.1-201ENST00000362913 68 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 Y_RNA.461-201ENST00000384263 103 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 HMGN2P10-201ENST00000448085 265 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC115115.1-201ENST00000449927 248 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 MRPL42P6-201ENST00000486397 371 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC104564.1-201ENST00000493028 407 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC097462.2-201ENST00000504623 481 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 Y_RNA.668-201ENST00000516233 93 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 RNA5SP360-201ENST00000516555 118 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 MIR4660-201ENST00000583549 74 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC125232.2-201ENST00000592457 143 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC103858.2-201ENST00000621471 543 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC007546.2-201ENST00000623996 360 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 AC091903.1-201ENST00000624322 454 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 DHX9P1-201ENST00000436565 3076 ntBASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM88BA6NKF7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 RNU6-770P-201ENST00000363929 105 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 Y_RNA.358-201ENST00000365491 99 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 RNU6-1286P-201ENST00000383871 107 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 MIR128-1-201ENST00000384921 82 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC074117.2-201ENST00000417130 397 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC243964.1-201ENST00000441814 261 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC090602.1-201ENST00000469695 252 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 RN7SKP272-201ENST00000516988 232 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AL442163.3-201ENST00000554110 156 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC009163.5-201ENST00000575421 637 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 RAC1P9-201ENST00000604990 392 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 RMST_6.1-201ENST00000611980 203 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC107871.2-201ENST00000612894 502 ntBASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
TMEM88BA6NKF7 AC092376.2-201ENST00000622621 4116 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 RNA5SP151-201ENST00000365632 117 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 RNU6-26P-201ENST00000383985 107 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 MIR708-201ENST00000390708 88 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 AL358453.1-201ENST00000422522 250 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 MED28P2-201ENST00000475771 317 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 RNU5F-8P-201ENST00000515941 111 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 AC109329.1-201ENST00000518744 317 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 HSPE1P20-201ENST00000538133 289 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 AC078899.3-201ENST00000599065 212 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 AC006557.5-201ENST00000603126 811 ntBASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TMEM88BA6NKF7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 Y_RNA.183-201ENST00000363882 113 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 SNORD115-32-201ENST00000364079 82 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 RNU6-611P-201ENST00000384276 104 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 BPY2DP-201ENST00000422208 265 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AC009296.1-201ENST00000443146 155 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 RNU2-53P-201ENST00000516257 147 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 RNA5SP309-201ENST00000516670 106 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 RNA5SP230-201ENST00000517039 122 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AC007375.1-201ENST00000554513 578 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AL391261.3-201ENST00000557194 520 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AC021739.1-201ENST00000559631 174 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms