Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.09□□□□□ -1.76
EPHB3P54753 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
EPHB3P54753 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.76
EPHB3P54753 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.09□□□□□ -1.76
EPHB3P54753 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
EPHB3P54753 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
EPHB3P54753 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB3P54753 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
EPHB3P54753 RNU1-108P-201ENST00000362556 161 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 U1.1-201ENST00000384101 164 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 RNU6-708P-201ENST00000384217 107 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 MIR215-201ENST00000384858 110 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 SNORD115-46-201ENST00000390982 71 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.08□□□□□ -1.76
EPHB3P54753 AL591419.1-201ENST00000427423 339 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.08□□□□□ -1.76
EPHB3P54753 AL159987.2-201ENST00000432754 307 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.08□□□□□ -1.76
EPHB3P54753 AC083863.1-201ENST00000438811 231 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.08□□□□□ -1.76
EPHB3P54753 AC069285.2-201ENST00000440210 275 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.08□□□□□ -1.76
EPHB3P54753 S100A11P1-201ENST00000477525 312 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 HMGN1P11-201ENST00000508668 303 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
EPHB3P54753 SNORA51-201ENST00000606420 132 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 U73479.1-201ENST00000618062 168 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 MIR7154-201ENST00000620673 73 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 AL450472.1-202ENST00000637286 180 ntBASIC4.08□□□□□ -1.76
EPHB3P54753 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
EPHB3P54753 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
EPHB3P54753 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
EPHB3P54753 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.07□□□□□ -1.76
EPHB3P54753 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 Y_RNA.65-201ENST00000362846 100 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.07□□□□□ -1.76
EPHB3P54753 Y_RNA.458-201ENST00000384240 102 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 RNU6-125P-201ENST00000384505 107 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 U8.11-201ENST00000384699 133 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 U8.12-201ENST00000384701 133 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 HSPE1P8-201ENST00000406997 288 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 RNU2-43P-201ENST00000410306 190 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC063979.1-201ENST00000415539 377 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.07□□□□□ -1.76
EPHB3P54753 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.07□□□□□ -1.76
EPHB3P54753 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 HMGB1P27-201ENST00000431429 603 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 MTCO3P29-201ENST00000432119 779 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.07□□□□□ -1.76
EPHB3P54753 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 U8.18-201ENST00000459285 133 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC133134.1-201ENST00000466800 359 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 RPL30P10-201ENST00000488148 337 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC074250.1-201ENST00000511117 192 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.07□□□□□ -1.76
EPHB3P54753 RNU1-95P-201ENST00000516357 160 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 RNU1-128P-201ENST00000516704 160 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 Y_RNA.713-201ENST00000517013 96 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC022868.1-201ENST00000517767 391 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.07□□□□□ -1.76
EPHB3P54753 DEFB108E-201ENST00000524692 240 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.07□□□□□ -1.76
EPHB3P54753 CBX3P4-201ENST00000538909 354 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 MTND6P33-201ENST00000571794 183 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC024220.1-201ENST00000603675 484 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AC243829.7-201ENST00000633081 225 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AL773545.4-201ENST00000637262 310 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AL513478.4-201ENST00000641636 310 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.07□□□□□ -1.76
EPHB3P54753 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 Z75746.1-201ENST00000440243 2080 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
EPHB3P54753 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
EPHB3P54753 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.07□□□□□ -1.76
EPHB3P54753 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
EPHB3P54753 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
EPHB3P54753 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
EPHB3P54753 RNA5SP52-201ENST00000362448 134 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 SNORA71.3-201ENST00000362582 128 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 RNU6-1266P-201ENST00000362794 105 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 Y_RNA.269-201ENST00000364685 89 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 SNORA73.2-201ENST00000364946 201 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 MIR1298-201ENST00000408783 112 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.06□□□□□ -1.76
EPHB3P54753 Y_RNA.644-201ENST00000459006 113 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 RNU7-120P-201ENST00000459334 63 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 snoU13.3-201ENST00000459441 104 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 RNU6-1037P-201ENST00000459571 107 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.06□□□□□ -1.76
EPHB3P54753 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.06□□□□□ -1.76
EPHB3P54753 RNU6-1338P-201ENST00000516328 91 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 Y_RNA.674-201ENST00000516362 113 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 Vault.1-201ENST00000516474 102 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 AC022695.1-201ENST00000522089 237 ntBASIC4.06□□□□□ -1.76
EPHB3P54753 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.06□□□□□ -1.76
EPHB3P54753 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms