Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL365400.1-201ENST00000431854 640 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN4AP35499 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC021382.1-201ENST00000483523 359 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 LARP1BP2-201ENST00000486594 519 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.8□□□□□ -2.12
SCN4AP35499 GLYCAM1-201ENST00000546596 285 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AL391261.3-201ENST00000557194 520 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 TRAV28-201ENST00000557548 323 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 MIR3167-201ENST00000579623 85 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 MIR4760-201ENST00000585040 80 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC121334.2-201ENST00000605387 271 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC107214.2-201ENST00000608204 634 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 SDR42E1P2-201ENST00000614861 481 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC025048.6-202ENST00000627667 438 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN4AP35499 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 Y_RNA.18-201ENST00000362461 102 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 Y_RNA.97-201ENST00000363094 102 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 RNU5E-6P-201ENST00000365574 115 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 RNU6-1035P-201ENST00000384477 107 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AL606517.1-201ENST00000446914 387 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC020550.1-201ENST00000447385 163 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AL136380.1-201ENST00000447970 162 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC090897.2-201ENST00000581715 130 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.8□□□□□ -2.12
SCN4AP35499 AL596327.1-201ENST00000603629 213 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC103706.2-201ENST00000638080 240 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AC006927.3-201ENST00000638789 384 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 MIR513B-201ENST00000385136 84 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 SNORA40C-201ENST00000391285 128 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 ZNF90P2-204ENST00000419323 1075 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN4AP35499 XKRYP1-201ENST00000423438 492 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AL356583.2-201ENST00000426536 280 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 XKRYP2-201ENST00000432915 492 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN4AP35499 KATNBL1P3-201ENST00000443475 909 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN4AP35499 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SCN4AP35499 AC138853.1-201ENST00000503549 823 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AC114786.4-201ENST00000508771 728 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AC114797.1-201ENST00000514003 728 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN4AP35499 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN4AP35499 AC005771.1-201ENST00000585581 349 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN4AP35499 AL031775.1-201ENST00000607014 887 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SCN4AP35499 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN4AP35499 AC023510.2-201ENST00000622162 746 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AF246928.1-201ENST00000623768 87 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 AC007490.1-201ENST00000624321 703 ntBASIC1.79□□□□□ -2.12
SCN4AP35499 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SCN4AP35499 RNU2-39P-201ENST00000410604 198 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 LARP1BP3-201ENST00000437229 869 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN4AP35499 MTND4LP16-201ENST00000440828 295 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.78□□□□□ -2.12
SCN4AP35499 MTND2P24-201ENST00000453434 806 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN4AP35499 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN4AP35499 MIR5571-201ENST00000577998 113 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN4AP35499 MIR3146-201ENST00000580367 79 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 BNIP3P23-201ENST00000599655 511 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 AP001981.2-201ENST00000603241 418 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 RNU6-87P-201ENST00000607561 108 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 AL355816.2-201ENST00000610049 647 ntBASIC1.78□□□□□ -2.12
SCN4AP35499 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN4AP35499 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN4AP35499 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.13
SCN4AP35499 AC138915.1-201ENST00000565427 1685 ntBASIC1.78□□□□□ -2.13
SCN4AP35499 MTND4P4-201ENST00000439033 1366 ntBASIC1.78□□□□□ -2.13
SCN4AP35499 SNORD113-6-201ENST00000363345 75 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 RNU6-853P-201ENST00000364306 107 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 MIR1284-201ENST00000408337 120 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN4AP35499 AL589872.1-201ENST00000426602 288 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 ELOCP14-201ENST00000428070 331 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 ELOCP7-201ENST00000439968 331 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN4AP35499 AC009296.1-201ENST00000443146 155 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 COX6CP12-201ENST00000446748 202 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 MTATP6P7-201ENST00000453315 681 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 SNORD42A-201ENST00000459584 64 ntBASIC1.77□□□□□ -2.13
SCN4AP35499 COX6CP14-201ENST00000469580 174 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms