Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNA5SP31-201ENST00000411144 127 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 RPL23AP36-201ENST00000413895 458 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 UQCRBP2-201ENST00000447827 297 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 SSXP4-201ENST00000451349 245 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.55□□□□□ -1.68
NFKB1P19838 AC074133.1-201ENST00000515696 183 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 RNY3P16-201ENST00000516338 101 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 AP006289.1-201ENST00000538089 277 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.55□□□□□ -1.68
NFKB1P19838 RPL21P9-201ENST00000556149 474 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.55□□□□□ -1.68
NFKB1P19838 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.55□□□□□ -1.68
NFKB1P19838 MIR7703-201ENST00000620784 77 ntBASIC4.55□□□□□ -1.68
NFKB1P19838 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.55□□□□□ -1.68
NFKB1P19838 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NFKB1P19838 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NFKB1P19838 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.54□□□□□ -1.68
NFKB1P19838 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.54□□□□□ -1.68
NFKB1P19838 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.54□□□□□ -1.68
NFKB1P19838 AC087190.4-201ENST00000574616 8334 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 Y_RNA.230-201ENST00000364348 109 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 Y_RNA.308-201ENST00000365043 101 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 RNU6-20P-201ENST00000384106 107 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 MIR10B-201ENST00000385011 110 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 RNA5SP44-201ENST00000410446 133 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.54□□□□□ -1.68
NFKB1P19838 AL772161.1-201ENST00000439130 476 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AL031659.1-201ENST00000447075 539 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 MRPS10P1-201ENST00000448483 130 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AC006026.2-201ENST00000457376 180 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AC010285.1-201ENST00000470580 392 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 RN7SL41P-201ENST00000476144 297 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AC231760.1-201ENST00000498002 260 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.54□□□□□ -1.68
NFKB1P19838 AP005660.1-201ENST00000522972 293 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AP004607.1-201ENST00000524456 203 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.54□□□□□ -1.68
NFKB1P19838 TRAV28-201ENST00000557548 323 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.54□□□□□ -1.68
NFKB1P19838 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.54□□□□□ -1.68
NFKB1P19838 AP002826.1-201ENST00000608835 315 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 AC005296.1-201ENST00000616145 209 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 AC135776.4-201ENST00000624300 1904 ntBASIC4.54□□□□□ -1.68
NFKB1P19838 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NFKB1P19838 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NFKB1P19838 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NFKB1P19838 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.53□□□□□ -1.68
NFKB1P19838 AC079741.1-201ENST00000321498 212 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 Y_RNA.319-201ENST00000365138 92 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNU6-1175P-201ENST00000365200 107 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNU6-281P-201ENST00000384212 103 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNU6-22P-201ENST00000384355 107 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNU6-541P-201ENST00000384709 110 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNU6-1001P-201ENST00000411265 100 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RPL7AP25-201ENST00000423357 805 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 COX6B1P7-201ENST00000430845 235 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 POLR2KP2-201ENST00000438155 177 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.53□□□□□ -1.68
NFKB1P19838 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.53□□□□□ -1.68
NFKB1P19838 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.53□□□□□ -1.68
NFKB1P19838 HMGB1P22-201ENST00000505315 124 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 AC091874.1-201ENST00000511402 339 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 SNORA40.9-201ENST00000515895 93 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNA5SP497-201ENST00000516081 97 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RNU6-479P-201ENST00000516348 105 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 ZNF192P1-203ENST00000565888 810 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 MIR5695-201ENST00000579717 85 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 RN7SL52P-201ENST00000584271 284 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 AC136601.2-201ENST00000604356 474 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 MIR6891-201ENST00000618788 93 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 AC007546.2-201ENST00000623996 360 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 MTND1P7-201ENST00000632801 297 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 U6.99-201ENST00000637524 83 ntBASIC4.53□□□□□ -1.68
NFKB1P19838 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NFKB1P19838 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NFKB1P19838 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NFKB1P19838 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
NFKB1P19838 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NFKB1P19838 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NFKB1P19838 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
NFKB1P19838 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.52□□□□□ -1.69
NFKB1P19838 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NFKB1P19838 RNA5SP307-201ENST00000362863 116 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 RNA5SP197-201ENST00000363357 119 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 RNU6-961P-201ENST00000363893 105 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 RNU6-335P-201ENST00000364563 113 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NFKB1P19838 SNORA29-201ENST00000384183 140 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 U8.10-201ENST00000384260 133 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 Y_RNA.580-201ENST00000391004 95 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
NFKB1P19838 RPL23AP26-201ENST00000412728 464 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms