Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL603910.2-201ENST00000407268 136 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 RAB9AP3-201ENST00000412737 573 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 AL353621.1-201ENST00000418219 243 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EPHB3P54753 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.11□□□□□ -1.75
EPHB3P54753 RANP8-201ENST00000444720 713 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 PRDX3P3-201ENST00000447765 522 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 AL358232.1-201ENST00000448030 501 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 RAB9AP1-201ENST00000449393 573 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 AL136097.1-201ENST00000456945 913 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 HMGN2P13-201ENST00000476476 274 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 AC067942.3-201ENST00000512025 362 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
EPHB3P54753 MIR548AC-201ENST00000585049 88 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.11□□□□□ -1.75
EPHB3P54753 AC073410.2-201ENST00000603240 332 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 MIR3976-201ENST00000606807 139 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 BX284668.6-201ENST00000606899 438 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.11□□□□□ -1.75
EPHB3P54753 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.11□□□□□ -1.75
EPHB3P54753 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.11□□□□□ -1.75
EPHB3P54753 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.11□□□□□ -1.75
EPHB3P54753 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EPHB3P54753 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
EPHB3P54753 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EPHB3P54753 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EPHB3P54753 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB3P54753 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
EPHB3P54753 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
EPHB3P54753 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
EPHB3P54753 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 RNU6-545P-201ENST00000362681 104 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 RNA5SP124-201ENST00000362739 110 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 SNORD81.1-201ENST00000363064 77 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 RNU6-595P-201ENST00000363944 107 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 Y_RNA.200-201ENST00000364018 102 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 Y_RNA.291-201ENST00000364886 113 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 RNU6-378P-201ENST00000384324 107 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 MIR449B-201ENST00000384995 97 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.1□□□□□ -1.75
EPHB3P54753 AC092423.1-201ENST00000430165 186 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 AL645939.1-201ENST00000453429 797 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.1□□□□□ -1.75
EPHB3P54753 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB3P54753 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB3P54753 RNU6-1095P-201ENST00000516148 108 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 RNU6-255P-201ENST00000516957 105 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 IGKV2-38-201ENST00000517443 247 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 IGKV2-23-201ENST00000518729 323 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 AC087499.8-201ENST00000578406 226 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 MIR5696-201ENST00000578474 85 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.1□□□□□ -1.75
EPHB3P54753 MIR3133-201ENST00000583157 78 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 AL713866.2-201ENST00000603579 219 ntBASIC4.1□□□□□ -1.75
EPHB3P54753 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.1□□□□□ -1.75
EPHB3P54753 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
EPHB3P54753 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EPHB3P54753 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB3P54753 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB3P54753 ZNF285B-201ENST00000561698 1767 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC106871.1-201ENST00000568324 3102 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.09□□□□□ -1.75
EPHB3P54753 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
EPHB3P54753 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB3P54753 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
EPHB3P54753 Y_RNA.27-201ENST00000362540 103 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 snoU2_19.2-201ENST00000363024 80 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 Y_RNA.324-201ENST00000365165 102 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 RNU6-700P-201ENST00000391043 107 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 MRPL35P1-201ENST00000404272 572 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.09□□□□□ -1.75
EPHB3P54753 AL139247.1-201ENST00000422768 325 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC092573.2-201ENST00000434546 243 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB3P54753 HLA-N-201ENST00000437516 135 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 HMGB1P37-201ENST00000439613 609 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB3P54753 AC008716.1-201ENST00000511084 513 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC006499.6-201ENST00000511169 607 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 RNA5SP164-201ENST00000516533 110 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.09□□□□□ -1.75
EPHB3P54753 AL121917.1-203ENST00000605534 577 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB3P54753 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB3P54753 RMST_4.1-201ENST00000616886 107 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 SNORD39.4-201ENST00000620099 78 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 AC132825.6-201ENST00000638861 357 ntBASIC4.09□□□□□ -1.75
EPHB3P54753 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB3P54753 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB3P54753 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms