Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL445523.1-201ENST00000451184 1362 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SCN4AP35499 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN4AP35499 RNU1-105P-201ENST00000363470 161 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNU6-1284P-201ENST00000363701 100 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNU6-621P-201ENST00000364752 109 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNU6-198P-201ENST00000384258 104 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 SNORA67.6-201ENST00000391093 99 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 SNORD115.1-201ENST00000391109 76 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN4AP35499 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN4AP35499 AL513185.2-201ENST00000425543 193 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC137499.1-201ENST00000427602 88 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 TXNL1P1-201ENST00000429528 554 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 MTCYBP39-201ENST00000437562 491 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 Z82210.1-201ENST00000440037 231 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN4AP35499 AL049734.2-201ENST00000441066 616 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC118469.1-201ENST00000442943 488 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 OR6C5P-201ENST00000452388 923 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN4AP35499 RNU7-125P-201ENST00000458760 62 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RPL30P6-201ENST00000475925 342 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNU6-1003P-201ENST00000517099 105 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNA5SP290-201ENST00000517133 127 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC087373.1-201ENST00000524920 491 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 AC091489.2-201ENST00000566263 604 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN4AP35499 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN4AP35499 AC007038.2-201ENST00000608095 740 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AL031601.2-202ENST00000622650 282 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SCN4AP35499 RNY4P24-201ENST00000362735 96 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNY3P13-201ENST00000365542 102 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNU6-157P-201ENST00000383957 107 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 RNU6-140P-201ENST00000384566 108 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 UBE2FP1-201ENST00000416536 447 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 MICF-203ENST00000432679 129 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 MTATP6P30-201ENST00000443540 664 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC244505.5-201ENST00000443639 207 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AL592447.1-201ENST00000447592 540 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN4AP35499 AC093809.1-201ENST00000509155 340 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN4AP35499 AC023050.2-201ENST00000544968 387 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 AL133153.1-201ENST00000557756 303 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN4AP35499 AC068135.2-201ENST00000569293 1028 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN4AP35499 AL603758.1-201ENST00000618654 241 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 AC079597.1-201ENST00000624306 508 ntBASIC1.82□□□□□ -2.12
SCN4AP35499 ZNF519P1-201ENST00000449011 1626 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SCN4AP35499 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SCN4AP35499 Y_RNA.245-201ENST00000364493 95 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 CD24P4-201ENST00000382840 243 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 MIR888-201ENST00000401186 77 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AL109755.1-201ENST00000401791 649 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 RPS20P2-201ENST00000402520 389 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AL355497.1-201ENST00000406262 551 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 PIGPP2-201ENST00000411569 458 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 Z99497.1-201ENST00000421282 135 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 RAC1P6-201ENST00000423911 575 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AL022400.1-201ENST00000423946 935 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AL445669.1-201ENST00000426743 755 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN4AP35499 UBE2D3P4-201ENST00000441973 436 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 AC010631.1-201ENST00000474150 156 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SCN4AP35499 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 MIR449C-201ENST00000516047 92 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 SCARNA3-201ENST00000517097 143 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN4AP35499 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN4AP35499 MIR4293-201ENST00000584305 78 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 HMGN2P15-201ENST00000585707 270 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AC079416.3-201ENST00000624479 549 ntBASIC1.81□□□□□ -2.12
SCN4AP35499 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN4AP35499 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN4AP35499 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SCN4AP35499 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 AC006366.1-201ENST00000422002 759 ntBASIC1.8□□□□□ -2.12
SCN4AP35499 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN4AP35499 MTND1P20-201ENST00000430341 950 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms