Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 CDC27P3-201ENST00000635418 1910 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
FOXD4Q12950 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXD4Q12950 RNU6-1287P-201ENST00000362914 107 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 SNORA75B-201ENST00000384053 137 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 Y_RNA.534-201ENST00000384599 112 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 RNU6-1060P-201ENST00000384664 107 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 RNU6-220P-201ENST00000390919 107 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 UBA52P6-201ENST00000399822 382 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXD4Q12950 OR51A5P-201ENST00000415429 942 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AL096701.2-201ENST00000416920 238 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AL109913.1-201ENST00000421173 514 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXD4Q12950 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 RNU7-182P-201ENST00000459009 62 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 RNU7-63P-201ENST00000459054 62 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC008155.2-201ENST00000464337 397 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AL121769.1-201ENST00000469473 401 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC025518.1-201ENST00000479856 347 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 AC117522.3-201ENST00000507974 584 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 RNA5SP401-201ENST00000515920 127 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FOXD4Q12950 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC025165.5-201ENST00000602802 578 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD4Q12950 AC093788.1-201ENST00000609356 927 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 AC122108.2-201ENST00000611946 526 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXD4Q12950 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
FOXD4Q12950 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXD4Q12950 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 Y_RNA.38-201ENST00000362617 102 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 SNORD3E-201ENST00000362899 217 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNA5SP197-201ENST00000363357 119 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNU6-1085P-201ENST00000363576 107 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 Y_RNA.510-201ENST00000384511 114 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNU6-550P-201ENST00000391057 101 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNU6-55P-201ENST00000411092 107 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNU6-954P-201ENST00000411355 107 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AC080125.1-201ENST00000414888 684 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FOXD4Q12950 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 CYCSP4-201ENST00000429682 331 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.18□□□□□ -1.9
FOXD4Q12950 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 SNORD105B-201ENST00000458770 79 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.18□□□□□ -1.9
FOXD4Q12950 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 SNORA31.6-201ENST00000516241 130 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNU6-1038P-201ENST00000516516 104 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AP005435.4-201ENST00000529514 284 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AC104383.1-201ENST00000530297 370 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
FOXD4Q12950 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXD4Q12950 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.18□□□□□ -1.9
FOXD4Q12950 AC005261.5-201ENST00000596280 355 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AL162713.1-201ENST00000604480 262 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 RNU6-91P-201ENST00000607774 107 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AC017083.3-201ENST00000609955 700 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AL355365.1-201ENST00000616480 294 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AP003355.3-201ENST00000623465 114 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 AC244517.12-201ENST00000623581 663 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 MIR203B-201ENST00000636080 86 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 AC103710.2-202ENST00000641454 2853 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXD4Q12950 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXD4Q12950 AL354685.2-201ENST00000448218 1447 ntBASIC3.18□□□□□ -1.9
FOXD4Q12950 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXD4Q12950 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXD4Q12950 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXD4Q12950 RNU6-996P-201ENST00000365438 107 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 SNORA69-201ENST00000383895 132 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXD4Q12950 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AC063979.1-201ENST00000415539 377 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AL160275.3-201ENST00000423876 471 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 RPS3AP44-201ENST00000425466 790 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AC007560.1-201ENST00000426912 237 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXD4Q12950 AC016691.1-201ENST00000441321 413 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms