Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL353777.1-201ENST00000425552 326 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN4AP35499 MTCYBP3-201ENST00000445588 1137 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 AL359385.1-201ENST00000456509 365 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 DUXAP8-207ENST00000456786 622 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC092991.1-201ENST00000477176 376 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 AC008526.1-201ENST00000509149 338 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN4AP35499 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN4AP35499 AL078603.1-201ENST00000603824 313 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC122133.1-201ENST00000613964 233 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC068831.7-201ENST00000616954 363 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AL049641.1-201ENST00000441055 1948 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.87□□□□□ -2.11
SCN4AP35499 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN4AP35499 AL451054.2-201ENST00000420896 202 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AL365496.1-201ENST00000426885 215 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 UBE2FP3-201ENST00000436366 524 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 ATP5J2P3-201ENST00000451550 258 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AL135752.1-201ENST00000479477 471 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN4AP35499 RNU6-311P-201ENST00000516224 102 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 RNU6-415P-201ENST00000516252 97 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AP000907.2-201ENST00000530827 353 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.87□□□□□ -2.11
SCN4AP35499 AC090888.2-201ENST00000559765 1144 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AL138976.2-201ENST00000563989 694 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN4AP35499 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC136443.5-201ENST00000603741 370 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 OR10AB1P-201ENST00000609613 938 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 AC112204.3-201ENST00000623822 332 ntBASIC1.87□□□□□ -2.11
SCN4AP35499 TPTE2P4-201ENST00000258589 1605 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SCN4AP35499 AC106754.1-201ENST00000562632 1513 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 RNU5E-8P-201ENST00000363502 116 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 SNORA4.1-201ENST00000364263 144 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 RNU6-342P-201ENST00000384521 104 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 MIR514A1-201ENST00000385133 98 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AL049545.1-201ENST00000401856 572 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 RNU2-62P-201ENST00000410868 191 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AC090774.1-201ENST00000435925 246 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AL512286.1-201ENST00000439244 400 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 OSTCP8-201ENST00000445117 448 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN4AP35499 SNORD97-201ENST00000459187 142 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 MRPL42P6-201ENST00000486397 371 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN4AP35499 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN4AP35499 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN4AP35499 AC147055.4-201ENST00000504399 745 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN4AP35499 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN4AP35499 AC110760.3-202ENST00000515177 371 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.86□□□□□ -2.11
SCN4AP35499 RNU6-150P-201ENST00000516237 95 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN4AP35499 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN4AP35499 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.86□□□□□ -2.11
SCN4AP35499 ANP32BP3-201ENST00000559213 706 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN4AP35499 AL161734.1-201ENST00000609720 557 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AC008443.7-201ENST00000622195 246 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.86□□□□□ -2.11
SCN4AP35499 AC006026.1-201ENST00000444025 1803 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
SCN4AP35499 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 U8.1-201ENST00000362843 134 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 RNY1-201ENST00000364228 113 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 RNA5SP354-201ENST00000391247 136 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC119751.3-201ENST00000399720 670 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 RNU6-516P-201ENST00000411381 104 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 MTND2P9-201ENST00000422293 931 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN4AP35499 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC092573.2-201ENST00000434546 243 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 RPL37P21-201ENST00000435890 276 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 MTCO3P45-201ENST00000443036 613 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN4AP35499 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN4AP35499 NRON-201ENST00000517270 370 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC135279.1-201ENST00000543493 504 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AC011604.1-201ENST00000545978 196 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AC136618.2-201ENST00000575091 400 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AC234772.3-201ENST00000602277 528 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC011939.3-201ENST00000613686 466 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms