Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MTCO2P11-201ENST00000431069 680 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 RPL23AP30-201ENST00000432419 501 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC119618.1-201ENST00000434191 222 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 RPL35AP22-201ENST00000436855 335 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC025750.2-201ENST00000442609 450 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 MTCO2P29-201ENST00000465212 189 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC010631.1-201ENST00000474150 156 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.38□□□□□ -2.03
HDAC3O15379 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HDAC3O15379 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.38□□□□□ -2.03
HDAC3O15379 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 RNU6-718P-201ENST00000516166 105 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 RNU6-314P-201ENST00000516574 104 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.38□□□□□ -2.03
HDAC3O15379 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 PRELID2P1-201ENST00000552837 301 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 MIR4658-201ENST00000584344 65 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC105224.1-201ENST00000587055 421 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 NRBF2P1-201ENST00000587407 859 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.38□□□□□ -2.03
HDAC3O15379 AL391646.1-201ENST00000603860 190 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MIR98-201ENST00000606724 119 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 U4.3-201ENST00000621047 82 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AC124864.2-201ENST00000624736 186 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MIR6863-201ENST00000636112 90 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HDAC3O15379 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
HDAC3O15379 AL365361.1-201ENST00000566942 3481 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDAC3O15379 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HDAC3O15379 DDX10P1-201ENST00000448545 1933 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 RNU6-181P-201ENST00000363225 107 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 Y_RNA.159-201ENST00000363674 87 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 Y_RNA.296-201ENST00000364930 108 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HDAC3O15379 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HDAC3O15379 Y_RNA.409-201ENST00000383990 98 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 MIR27B-201ENST00000385129 97 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 MTND1P23-201ENST00000416931 372 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 PIGFP2-201ENST00000421400 651 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 COTL1P1-201ENST00000422309 375 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC133104.1-201ENST00000429100 218 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC009296.1-201ENST00000443146 155 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AL513328.1-201ENST00000446460 224 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC3O15379 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.37□□□□□ -2.03
HDAC3O15379 RNU7-26P-201ENST00000458980 63 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AL121769.1-201ENST00000469473 401 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AL049874.1-201ENST00000489560 388 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC3O15379 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.37□□□□□ -2.03
HDAC3O15379 RNU6-445P-201ENST00000516949 107 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC090572.1-201ENST00000519251 160 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HDAC3O15379 AK6P1-201ENST00000540219 478 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC3O15379 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC136619.2-201ENST00000563361 631 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC3O15379 HMGB1P6-201ENST00000569046 646 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AP001094.1-201ENST00000579805 193 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 LARP7P3-201ENST00000579888 337 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AF038458.1-201ENST00000588406 262 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC005498.1-201ENST00000592125 465 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC3O15379 AC245014.2-201ENST00000603689 287 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 DPPA3P3-201ENST00000603842 430 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AL033523.1-201ENST00000605153 153 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC246785.4-201ENST00000605374 287 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 AC090517.2-201ENST00000614966 680 ntBASIC2.37□□□□□ -2.03
HDAC3O15379 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HDAC3O15379 OR4G2P-202ENST00000641004 1759 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HDAC3O15379 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.36□□□□□ -2.03
HDAC3O15379 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HDAC3O15379 RNU6-859P-201ENST00000362728 107 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 RNU6-188P-201ENST00000364207 107 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 Y_RNA.381-201ENST00000365666 102 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 MTCO3P40-201ENST00000392516 676 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 AC068050.1-201ENST00000394891 380 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HDAC3O15379 RNU4-55P-201ENST00000410731 137 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 AL353193.1-201ENST00000421444 268 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms