Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPL7P10-201ENST00000417407 739 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.74□□□□□ -1.81
PNKPQ96T60 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.74□□□□□ -1.81
PNKPQ96T60 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.74□□□□□ -1.81
PNKPQ96T60 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.74□□□□□ -1.81
PNKPQ96T60 MTND4P19-201ENST00000446659 478 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 MTND1P17-201ENST00000448961 204 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 NDUFS5P3-201ENST00000450668 321 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.74□□□□□ -1.81
PNKPQ96T60 Y_RNA.639-201ENST00000458981 102 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 RPL21P41-201ENST00000459863 264 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AC104136.1-201ENST00000512969 394 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 RNU6-1332P-201ENST00000516666 104 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 SNORA70.24-201ENST00000517233 118 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AC104027.1-201ENST00000521887 300 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 RNU6-323P-201ENST00000521915 107 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 SNRPGP16-201ENST00000533275 226 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.74□□□□□ -1.81
PNKPQ96T60 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.74□□□□□ -1.81
PNKPQ96T60 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.74□□□□□ -1.81
PNKPQ96T60 IMMP1LP2-201ENST00000552954 492 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PNKPQ96T60 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.74□□□□□ -1.81
PNKPQ96T60 AL360085.1-201ENST00000604713 532 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 AL080274.1-201ENST00000605565 220 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PNKPQ96T60 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PNKPQ96T60 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PNKPQ96T60 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PNKPQ96T60 PWAR6-201ENST00000552334 4618 ntBASIC3.74□□□□□ -1.81
PNKPQ96T60 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PNKPQ96T60 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
PNKPQ96T60 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.73□□□□□ -1.81
PNKPQ96T60 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.73□□□□□ -1.81
PNKPQ96T60 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PNKPQ96T60 Y_RNA.135-201ENST00000363439 95 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 RNU6-525P-201ENST00000363685 104 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 SNORA4.3-201ENST00000365564 137 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 MIR491-201ENST00000384877 84 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 MIR514A1-201ENST00000385133 98 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 MIR559-201ENST00000385188 96 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AL513331.1-201ENST00000411908 397 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AC126124.2-201ENST00000413542 321 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 RPL21P90-201ENST00000415692 466 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 BTF3L4P3-201ENST00000418879 476 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 MTND2P23-201ENST00000422990 651 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.73□□□□□ -1.81
PNKPQ96T60 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.73□□□□□ -1.81
PNKPQ96T60 RPL23AP22-201ENST00000437556 453 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AC125238.1-201ENST00000448842 249 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.73□□□□□ -1.81
PNKPQ96T60 RNU7-152P-201ENST00000458982 64 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 RPS27P29-201ENST00000463110 252 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AC092451.1-201ENST00000480211 153 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 RNU6-927P-201ENST00000516199 100 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 RNA5SP471-201ENST00000516971 106 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 ELOCP31-201ENST00000540463 467 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.73□□□□□ -1.81
PNKPQ96T60 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.73□□□□□ -1.81
PNKPQ96T60 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.73□□□□□ -1.81
PNKPQ96T60 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.73□□□□□ -1.81
PNKPQ96T60 AC006077.1-201ENST00000604746 343 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 MIR7851-201ENST00000610611 160 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 AC034102.8-201ENST00000615146 484 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PNKPQ96T60 AC091953.5-201ENST00000622919 233 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.73□□□□□ -1.81
PNKPQ96T60 ZNF826P-207ENST00000622273 1910 ntBASIC3.73□□□□□ -1.81
PNKPQ96T60 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.73□□□□□ -1.81
PNKPQ96T60 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 UBE2L2-201ENST00000254302 429 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.72□□□□□ -1.81
PNKPQ96T60 RNU6-562P-201ENST00000362731 107 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.72□□□□□ -1.81
PNKPQ96T60 Y_RNA.534-201ENST00000384599 112 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 MIR483-201ENST00000385070 76 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 RPL5P18-201ENST00000406671 891 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.72□□□□□ -1.81
PNKPQ96T60 AC017079.2-201ENST00000416102 485 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.72□□□□□ -1.81
PNKPQ96T60 AL590632.1-201ENST00000424289 371 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 AC091390.3-201ENST00000426478 338 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 NIPA2P5-201ENST00000452282 464 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 RPL7P5-201ENST00000471472 736 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 RPL32P34-201ENST00000486380 400 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.72□□□□□ -1.81
PNKPQ96T60 AC093303.1-201ENST00000514549 295 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
PNKPQ96T60 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PNKPQ96T60 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.72□□□□□ -1.81
PNKPQ96T60 AC004024.1-201ENST00000549244 247 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms