Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC109327.2-201ENST00000448339 378 ntBASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 FABP5P15-201ENST00000453566 214 ntBASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 RNA5SP54-201ENST00000516951 92 ntBASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 UBE2Q2P8-201ENST00000560644 102 ntBASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 MIR5699-201ENST00000578903 90 ntBASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC61Q9Y6R9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 MIR548A1-201ENST00000385041 97 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 MIR526A2-201ENST00000390198 65 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 RNA5SP397-201ENST00000391323 118 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 RNU6-1245P-201ENST00000411130 106 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 RPS3AP1-201ENST00000413190 320 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 EDDM3CP-201ENST00000415977 425 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 AC112220.1-201ENST00000434628 355 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 AL078601.1-201ENST00000444542 271 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 MIR5688-201ENST00000580619 83 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 AC139713.2-214ENST00000642059 1811 ntBASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC61Q9Y6R9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 RNU6-1164P-201ENST00000364428 107 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 SNORD58C-201ENST00000365223 64 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 RNU6-106P-201ENST00000384405 107 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AL606845.1-201ENST00000404881 255 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 RPS21P8-201ENST00000413365 247 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 YPEL5P1-201ENST00000419731 367 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AL732292.1-201ENST00000426692 226 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AC091874.1-201ENST00000511402 339 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 MIR4277-201ENST00000578298 84 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AL356218.2-201ENST00000605264 187 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AC062037.1-201ENST00000605302 128 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 AC024581.2-201ENST00000619986 252 ntBASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC61Q9Y6R9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC61Q9Y6R9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 U3.9-201ENST00000363823 204 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 Y_RNA.179-201ENST00000363844 90 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-19P-201ENST00000384718 107 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 RNA5SP475-201ENST00000410568 110 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 AL354868.1-201ENST00000417077 482 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 CYCSP10-201ENST00000417973 294 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 HSPE1P21-201ENST00000438283 308 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 RN7SL517P-201ENST00000462240 305 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 HSPE1P6-201ENST00000479457 291 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-412P-201ENST00000516434 106 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 PARP1P2-201ENST00000556806 195 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 ADAM24P-201ENST00000398655 2101 ntBASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC61Q9Y6R9 AP005435.3-201ENST00000531260 3198 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-356P-201ENST00000384140 107 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-49P-201ENST00000384256 107 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 MT-TT-201ENST00000387460 66 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 HMGB3P8-201ENST00000449709 577 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 TLK1P1-201ENST00000456760 2440 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms