Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC23.98■■□□□ 1.43
NclP09405 Gm7506-201ENSMUST00000207758 815 ntBASIC23.98■■□□□ 1.43
NclP09405 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
NclP09405 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NclP09405 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
NclP09405 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NclP09405 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
NclP09405 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC23.96■■□□□ 1.43
NclP09405 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC23.96■■□□□ 1.43
NclP09405 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
NclP09405 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC23.96■■□□□ 1.43
NclP09405 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NclP09405 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
NclP09405 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC23.95■■□□□ 1.42
NclP09405 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
NclP09405 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC23.95■■□□□ 1.42
NclP09405 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC23.95■■□□□ 1.42
NclP09405 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NclP09405 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC23.94■■□□□ 1.42
NclP09405 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
NclP09405 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC23.94■■□□□ 1.42
NclP09405 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC23.94■■□□□ 1.42
NclP09405 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC23.94■■□□□ 1.42
NclP09405 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NclP09405 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC23.93■■□□□ 1.42
NclP09405 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Gm8349-201ENSMUST00000182720 1003 ntBASIC23.93■■□□□ 1.42
NclP09405 Gm2651-201ENSMUST00000203560 838 ntBASIC23.93■■□□□ 1.42
NclP09405 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
NclP09405 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
NclP09405 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NclP09405 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC23.92■■□□□ 1.42
NclP09405 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NclP09405 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NclP09405 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC23.92■■□□□ 1.42
NclP09405 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 Gm45774-201ENSMUST00000211992 2665 ntBASIC23.92■■□□□ 1.42
NclP09405 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NclP09405 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NclP09405 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NclP09405 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC23.91■■□□□ 1.42
NclP09405 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC23.91■■□□□ 1.42
NclP09405 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NclP09405 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms