Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 Y_RNA.693-201ENST00000516641 110 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 SNORA20.3-201ENST00000516880 132 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 RNU6-445P-201ENST00000516949 107 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC106782.4-201ENST00000568264 210 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC008536.2-201ENST00000607284 349 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC004908.2-201ENST00000609090 574 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AL359314.1-201ENST00000616913 261 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC073308.1-201ENST00000623696 305 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 AC091953.2-201ENST00000623979 160 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 MIR1321-201ENST00000637766 79 ntBASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX43Q9NXZ2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 SNORA72.1-201ENST00000363485 129 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 RNA5SP139-201ENST00000364340 117 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AL451054.2-201ENST00000420896 202 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 ELOCP14-201ENST00000428070 331 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 ARPC3P1-201ENST00000437218 533 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 ELOCP7-201ENST00000439968 331 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 SNRPEP8-201ENST00000442866 260 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 snoU13.28-201ENST00000459235 104 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 RPS20P22-201ENST00000473700 357 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 MTCYBP18-201ENST00000501056 747 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 RNU6-358P-201ENST00000516564 75 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 Y_RNA.704-201ENST00000516851 102 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC107934.1-201ENST00000522215 217 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AL133153.1-201ENST00000557756 303 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 MIR3167-201ENST00000579623 85 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AL161629.2-201ENST00000615347 275 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC112204.3-201ENST00000623822 332 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 AC092125.1-201ENST00000562568 1995 ntBASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX43Q9NXZ2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 Y_RNA.38-201ENST00000362617 102 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 RNU6-694P-201ENST00000364071 147 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 RNU6-483P-201ENST00000384088 108 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AL513331.1-201ENST00000411908 397 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 MTCO1P20-201ENST00000425366 358 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC002486.1-201ENST00000435098 391 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 BNIP3P2-201ENST00000441221 577 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 MTND5P20-201ENST00000448677 143 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 MTND1P12-201ENST00000455231 147 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC008481.1-201ENST00000463278 396 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 RPS29P26-201ENST00000477483 171 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 RNA5SP76-201ENST00000516277 87 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AC109635.3-201ENST00000529536 185 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AP000857.1-201ENST00000532151 543 ntBASIC3.16□□□□□ -1.9
DDX43Q9NXZ2 AP003034.1-201ENST00000534621 422 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms