Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB3P54753 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB3P54753 AC025627.2-201ENST00000576220 160 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB3P54753 MIR5684-201ENST00000585074 65 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 FTX_2.1-201ENST00000618816 94 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 MIR7702-201ENST00000621931 59 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB3P54753 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB3P54753 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB3P54753 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB3P54753 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
EPHB3P54753 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
EPHB3P54753 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
EPHB3P54753 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
EPHB3P54753 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.29□□□□□ -1.72
EPHB3P54753 Y_RNA.64-201ENST00000362845 102 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-770P-201ENST00000363929 105 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 SNORA62.3-201ENST00000365110 153 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-806P-201ENST00000365147 105 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-1329P-201ENST00000365664 107 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-701P-201ENST00000384059 107 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-190P-201ENST00000384154 102 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-174P-201ENST00000410406 106 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RPS12P5-201ENST00000423449 371 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 MTCO3P8-201ENST00000453691 755 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
EPHB3P54753 RN7SL542P-201ENST00000467147 294 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 AC010631.1-201ENST00000474150 156 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 RNU6-111P-201ENST00000517179 105 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.29□□□□□ -1.72
EPHB3P54753 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.29□□□□□ -1.72
EPHB3P54753 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.29□□□□□ -1.72
EPHB3P54753 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.29□□□□□ -1.72
EPHB3P54753 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.29□□□□□ -1.72
EPHB3P54753 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.29□□□□□ -1.72
EPHB3P54753 ELOCP5-201ENST00000604924 333 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 AL158032.1-201ENST00000605401 106 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 MIR4496-201ENST00000635896 61 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.29□□□□□ -1.72
EPHB3P54753 AC016588.2-201ENST00000632484 3021 ntBASIC4.29□□□□□ -1.72
EPHB3P54753 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB3P54753 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
EPHB3P54753 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
EPHB3P54753 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
EPHB3P54753 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EPHB3P54753 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
EPHB3P54753 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
EPHB3P54753 MTND5P6-201ENST00000422338 1798 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 PABPC1P7-201ENST00000413177 1513 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 Y_RNA.20-201ENST00000362479 113 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 Y_RNA.151-201ENST00000363566 112 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 Y_RNA.480-201ENST00000384364 102 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 SNORA70E-201ENST00000384492 135 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AL445529.1-201ENST00000398713 389 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AL139039.1-201ENST00000401900 692 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 RNU6-1156P-201ENST00000410365 100 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 BX276092.3-201ENST00000424182 230 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 SDAD1P3-201ENST00000427380 333 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 RPS3AP12-201ENST00000443616 753 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 RPL23AP31-201ENST00000456160 467 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 RPL31P60-201ENST00000478450 367 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 RNU7-4P-201ENST00000516961 62 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AP006587.4-201ENST00000526053 529 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.28□□□□□ -1.72
EPHB3P54753 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
EPHB3P54753 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.28□□□□□ -1.72
EPHB3P54753 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.28□□□□□ -1.72
EPHB3P54753 RPL23AP87-202ENST00000573039 466 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 MIR5685-201ENST00000579080 79 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AC007566.2-201ENST00000603642 413 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AC009779.6-201ENST00000603972 165 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 MIR6868-201ENST00000611215 58 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 AC091903.1-201ENST00000624322 454 ntBASIC4.28□□□□□ -1.72
EPHB3P54753 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
EPHB3P54753 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
EPHB3P54753 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
EPHB3P54753 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
EPHB3P54753 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.28□□□□□ -1.72
EPHB3P54753 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.28□□□□□ -1.72
EPHB3P54753 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
EPHB3P54753 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
EPHB3P54753 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
EPHB3P54753 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EPHB3P54753 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EPHB3P54753 DDX10P1-201ENST00000448545 1933 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 FAM91A3P-201ENST00000456826 2544 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
EPHB3P54753 AC138393.1-203ENST00000327086 343 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 Y_RNA.19-201ENST00000362462 99 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 SNORD35B-201ENST00000363660 87 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms