Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL645733.1-201ENST00000402250 217 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 TOMM20P4-201ENST00000427861 435 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 AL627311.1-201ENST00000431514 115 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 RPS20P1-201ENST00000434853 354 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 HSPE1P25-201ENST00000455484 251 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 RPS5P7-201ENST00000456664 608 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 AC108751.2-201ENST00000469993 231 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.81□□□□□ -1.64
NFKB1P19838 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.81□□□□□ -1.64
NFKB1P19838 AC104164.2-201ENST00000496953 495 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 SCARNA22-201ENST00000503991 125 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 AC108043.1-201ENST00000512696 574 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.81□□□□□ -1.64
NFKB1P19838 AC005476.1-201ENST00000554427 397 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 AC023824.2-201ENST00000566185 400 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 AL139395.1-201ENST00000603662 160 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 AC021753.1-201ENST00000635724 168 ntBASIC4.81□□□□□ -1.64
NFKB1P19838 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.81□□□□□ -1.64
NFKB1P19838 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.81□□□□□ -1.64
NFKB1P19838 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NFKB1P19838 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.8□□□□□ -1.64
NFKB1P19838 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 AL391684.1-202ENST00000641293 1636 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 Y_RNA.44-201ENST00000362676 108 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 RNU4-90P-201ENST00000362773 141 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 RNU6-1074P-201ENST00000383995 104 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 LAP3P1-201ENST00000403648 294 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 Y_RNA.626-201ENST00000411288 95 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.8□□□□□ -1.64
NFKB1P19838 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.8□□□□□ -1.64
NFKB1P19838 FABP5P15-201ENST00000453566 214 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.8□□□□□ -1.64
NFKB1P19838 RN7SL329P-201ENST00000467740 299 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 RPS29P26-201ENST00000477483 171 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AC093270.2-201ENST00000486157 792 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 MRPL42P6-201ENST00000486397 371 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AL049874.1-201ENST00000489560 388 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.8□□□□□ -1.64
NFKB1P19838 AC107918.3-201ENST00000533272 382 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AL161713.1-201ENST00000555538 145 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AC090617.3-201ENST00000573670 475 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 MIR4659A-201ENST00000580269 81 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AC023575.1-201ENST00000580510 358 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AC211433.2-201ENST00000608433 387 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 AL672167.1-203ENST00000641299 2975 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.8□□□□□ -1.64
NFKB1P19838 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NFKB1P19838 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 LINC01355-201ENST00000566551 5444 ntBASIC4.8□□□□□ -1.64
NFKB1P19838 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
NFKB1P19838 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NFKB1P19838 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NFKB1P19838 AL450326.2-201ENST00000421913 1962 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NFKB1P19838 RNU6-428P-201ENST00000362942 107 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 Y_RNA.123-201ENST00000363338 102 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 RN7SKP224-201ENST00000364140 325 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 RNY4P28-201ENST00000365281 93 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 MIR153-1-201ENST00000384914 90 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 MIR10A-201ENST00000385043 110 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 MIR514A1-201ENST00000385133 98 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 MIR613-201ENST00000385248 95 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NFKB1P19838 AL033519.2-201ENST00000403958 392 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 RNA5SP113-201ENST00000410486 84 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.79□□□□□ -1.64
NFKB1P19838 RPL21P40-201ENST00000428586 483 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 RPS27P18-201ENST00000431701 247 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.79□□□□□ -1.64
NFKB1P19838 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.79□□□□□ -1.64
NFKB1P19838 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 AC072026.1-201ENST00000605023 201 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.79□□□□□ -1.64
NFKB1P19838 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NFKB1P19838 AC000123.3-201ENST00000624029 4975 ntBASIC4.79□□□□□ -1.64
NFKB1P19838 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NFKB1P19838 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NFKB1P19838 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.79□□□□□ -1.64
NFKB1P19838 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.79□□□□□ -1.64
NFKB1P19838 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NFKB1P19838 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NFKB1P19838 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
NFKB1P19838 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.78□□□□□ -1.64
NFKB1P19838 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NFKB1P19838 OR4G2P-202ENST00000641004 1759 ntBASIC4.78□□□□□ -1.64
NFKB1P19838 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NFKB1P19838 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.78□□□□□ -1.64
NFKB1P19838 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NFKB1P19838 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NFKB1P19838 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.78□□□□□ -1.64
NFKB1P19838 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
NFKB1P19838 RNU6-1301P-201ENST00000362724 104 ntBASIC4.78□□□□□ -1.64
NFKB1P19838 RNU6-1020P-201ENST00000363684 107 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 474.3 ms