Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KLF4O43474 Y_RNA.112-201ENST00000363250 102 ntBASIC4.14□□□□□ -1.75
KLF4O43474 RN7SKP280-201ENST00000364196 304 ntBASIC4.14□□□□□ -1.75
KLF4O43474 RNA5SP515-201ENST00000364570 118 ntBASIC4.14□□□□□ -1.75
KLF4O43474 RNA5SP22-201ENST00000365393 109 ntBASIC4.14□□□□□ -1.75
KLF4O43474 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
KLF4O43474 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.14□□□□□ -1.75
KLF4O43474 Z98749.2-208ENST00000381646 500 ntBASIC4.14□□□□□ -1.75
KLF4O43474 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KLF4O43474 RAB9AP3-201ENST00000412737 573 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.14□□□□□ -1.75
KLF4O43474 NUTF2P3-201ENST00000448540 384 ntBASIC4.14□□□□□ -1.75
KLF4O43474 RAB9AP1-201ENST00000449393 573 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AP002884.2-201ENST00000471647 395 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.14□□□□□ -1.75
KLF4O43474 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.14□□□□□ -1.75
KLF4O43474 SNORA43.2-201ENST00000516652 128 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.14□□□□□ -1.75
KLF4O43474 AP005902.1-201ENST00000521358 186 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AC007991.1-201ENST00000522680 631 ntBASIC4.14□□□□□ -1.75
KLF4O43474 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.14□□□□□ -1.75
KLF4O43474 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.14□□□□□ -1.75
KLF4O43474 MIR4284-201ENST00000578924 81 ntBASIC4.14□□□□□ -1.75
KLF4O43474 MIR4697-201ENST00000582977 78 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.14□□□□□ -1.75
KLF4O43474 AL451007.1-201ENST00000595491 289 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AC022432.1-201ENST00000595739 310 ntBASIC4.14□□□□□ -1.75
KLF4O43474 SRGNP1-201ENST00000603392 451 ntBASIC4.14□□□□□ -1.75
KLF4O43474 MIR8076-201ENST00000611401 83 ntBASIC4.14□□□□□ -1.75
KLF4O43474 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
KLF4O43474 uc_338.22-201ENST00000622722 187 ntBASIC4.14□□□□□ -1.75
KLF4O43474 AC091905.2-201ENST00000623143 306 ntBASIC4.14□□□□□ -1.75
KLF4O43474 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KLF4O43474 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.14□□□□□ -1.75
KLF4O43474 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
KLF4O43474 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KLF4O43474 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.14□□□□□ -1.75
KLF4O43474 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KLF4O43474 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KLF4O43474 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
KLF4O43474 RNU6-1059P-201ENST00000363752 98 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AC117470.1-201ENST00000381974 330 ntBASIC4.13□□□□□ -1.75
KLF4O43474 RNU1-63P-201ENST00000383902 164 ntBASIC4.13□□□□□ -1.75
KLF4O43474 RNU1-44P-201ENST00000384453 163 ntBASIC4.13□□□□□ -1.75
KLF4O43474 RNU6-331P-201ENST00000384724 107 ntBASIC4.13□□□□□ -1.75
KLF4O43474 MIR518D-201ENST00000385014 87 ntBASIC4.13□□□□□ -1.75
KLF4O43474 RPL18P10-201ENST00000425606 538 ntBASIC4.13□□□□□ -1.75
KLF4O43474 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.13□□□□□ -1.75
KLF4O43474 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AL162151.2-201ENST00000448875 158 ntBASIC4.13□□□□□ -1.75
KLF4O43474 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.13□□□□□ -1.75
KLF4O43474 RPL23AP14-201ENST00000468281 468 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AC068781.1-201ENST00000488231 618 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.13□□□□□ -1.75
KLF4O43474 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
KLF4O43474 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.13□□□□□ -1.75
KLF4O43474 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.13□□□□□ -1.75
KLF4O43474 SCARNA16.2-201ENST00000516520 172 ntBASIC4.13□□□□□ -1.75
KLF4O43474 RNU6-612P-201ENST00000516909 102 ntBASIC4.13□□□□□ -1.75
KLF4O43474 Y_RNA.711-201ENST00000516993 102 ntBASIC4.13□□□□□ -1.75
KLF4O43474 IGLV3-26-201ENST00000520756 302 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AC022634.1-201ENST00000520765 532 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.13□□□□□ -1.75
KLF4O43474 MIR4715-201ENST00000584117 79 ntBASIC4.13□□□□□ -1.75
KLF4O43474 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.13□□□□□ -1.75
KLF4O43474 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.13□□□□□ -1.75
KLF4O43474 MIR3976-201ENST00000606807 139 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AL731566.2-201ENST00000618971 317 ntBASIC4.13□□□□□ -1.75
KLF4O43474 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.13□□□□□ -1.75
KLF4O43474 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KLF4O43474 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.13□□□□□ -1.75
KLF4O43474 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
KLF4O43474 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
KLF4O43474 AC007256.1-201ENST00000392253 2765 ntBASIC4.13□□□□□ -1.75
KLF4O43474 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KLF4O43474 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.12□□□□□ -1.75
KLF4O43474 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 AC139713.2-215ENST00000641428 5037 ntBASIC4.12□□□□□ -1.75
KLF4O43474 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.12□□□□□ -1.75
KLF4O43474 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 AC007823.1-201ENST00000569932 1566 ntBASIC4.12□□□□□ -1.75
KLF4O43474 RNU6-428P-201ENST00000362942 107 ntBASIC4.12□□□□□ -1.75
KLF4O43474 U8.8-201ENST00000365399 135 ntBASIC4.12□□□□□ -1.75
KLF4O43474 RNU6-842P-201ENST00000384269 107 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AL591034.2-201ENST00000402839 359 ntBASIC4.12□□□□□ -1.75
KLF4O43474 RNU6-174P-201ENST00000410406 106 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 BPY2DP-201ENST00000422208 265 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC006946.1-201ENST00000429106 328 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.12□□□□□ -1.75
KLF4O43474 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 HMGN2P10-201ENST00000448085 265 ntBASIC4.12□□□□□ -1.75
KLF4O43474 NUTF2P7-201ENST00000453086 375 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC103987.1-201ENST00000473394 348 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC069499.1-201ENST00000489433 509 ntBASIC4.12□□□□□ -1.75
KLF4O43474 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 PTP4A1P4-201ENST00000512479 322 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC134698.5-201ENST00000519444 336 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms