Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 MIR634-201ENST00000385208 97 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AC074117.2-201ENST00000417130 397 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 RPL30P13-201ENST00000418873 348 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 PTGES3P4-201ENST00000426243 356 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AL691517.1-201ENST00000440833 1235 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AL137159.1-201ENST00000452808 512 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 SNORA25.11-201ENST00000515935 105 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 RNU6-250P-201ENST00000516958 103 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 CYB5AP5-201ENST00000549779 389 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 BX248123.2-201ENST00000606318 124 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AL109620.1-201ENST00000618738 1197 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 AL596245.1-201ENST00000618994 362 ntBASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV13-1A0A0B4J241 UBE2L2-201ENST00000254302 429 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 RNU1-39P-201ENST00000383897 165 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 SNORD65C-201ENST00000390962 71 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 RNA5SP465-201ENST00000391195 109 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AL591034.2-201ENST00000402839 359 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 RNU4-26P-201ENST00000410270 107 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 MTATP6P27-201ENST00000416987 621 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 BX510359.4-201ENST00000423750 193 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 MTCYBP32-201ENST00000427945 1084 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 SSXP1-201ENST00000453640 473 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 USP9YP10-201ENST00000454868 628 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 TRBV12-1-201ENST00000479785 344 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 FO393415.2-201ENST00000480085 343 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 RPS29P21-201ENST00000496272 170 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 SNORA25.15-201ENST00000516487 89 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 EEF1A1P37-201ENST00000522748 715 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC091544.4-201ENST00000555268 342 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 YWHAZP1-201ENST00000556286 722 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC023825.1-201ENST00000566704 1030 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 SNRPGP17-201ENST00000603780 214 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC011451.2-201ENST00000604303 598 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AP005229.2-201ENST00000609980 697 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 DUSP12P1-201ENST00000612874 516 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 AC011939.3-201ENST00000613686 466 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 MIR7974-201ENST00000615835 79 ntBASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
TRAV13-1A0A0B4J241 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 RNU1-42P-201ENST00000364033 160 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 MIR150-201ENST00000385048 84 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 MIR504-201ENST00000385065 83 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 MIR320A-201ENST00000385302 82 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 BTF3L4P2-201ENST00000392798 346 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AC078974.1-201ENST00000411597 223 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AC007098.1-201ENST00000420122 367 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 UBE2V1P4-201ENST00000425374 344 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AL513185.2-201ENST00000425543 193 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AL445669.1-201ENST00000426743 755 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 RPL7P34-201ENST00000433316 712 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 RPL36AP48-201ENST00000485521 314 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 RNA5SP290-201ENST00000517133 127 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 MTCO2P15-201ENST00000532655 656 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AK6P1-201ENST00000540219 478 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 SUB1P3-201ENST00000564581 315 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AC092953.2-201ENST00000608000 699 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 AC009318.2-201ENST00000610917 651 ntBASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV13-1A0A0B4J241 SNORD114-1-201ENST00000362705 72 ntBASIC1.03□□□□□ -2.24
TRAV13-1A0A0B4J241 SNORD26-201ENST00000384147 75 ntBASIC1.03□□□□□ -2.24
TRAV13-1A0A0B4J241 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
TRAV13-1A0A0B4J241 AL627390.1-201ENST00000396055 340 ntBASIC1.03□□□□□ -2.24
TRAV13-1A0A0B4J241 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV13-1A0A0B4J241 MTND4LP14-201ENST00000429447 288 ntBASIC1.03□□□□□ -2.24
TRAV13-1A0A0B4J241 HMGN2P3-201ENST00000433603 273 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms