Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 CCT4P2-201ENST00000233836 1548 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC233263.6-201ENST00000631132 1963 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 DDX10P1-201ENST00000448545 1933 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RNU5E-4P-201ENST00000364931 120 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RNA5SP252-201ENST00000391131 119 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 SNORD115-47-201ENST00000391226 86 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC110754.1-201ENST00000399740 601 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 CALM2P3-201ENST00000400429 449 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RPS20P2-201ENST00000402520 389 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RNU6-516P-201ENST00000411381 104 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 USP9YP6-201ENST00000413550 854 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 MTCO2P19-201ENST00000427513 598 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC008850.1-201ENST00000427546 362 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 MTND2P24-201ENST00000453434 806 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RPL21P8-201ENST00000465083 535 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 S100A11P2-201ENST00000467589 312 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC019235.1-201ENST00000503847 207 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RNU2-46P-201ENST00000517038 113 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 MIR548S-201ENST00000581352 82 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 HMGN1P30-201ENST00000589286 268 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC013553.2-201ENST00000604244 589 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 MIR3688-2-201ENST00000636963 87 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 OR4G2P-202ENST00000641004 1759 ntBASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX43Q9NXZ2 AC009902.3-201ENST00000606235 2172 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 CR848007.1-201ENST00000442354 1699 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 SNORA71.1-201ENST00000364523 117 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 RNU6-754P-201ENST00000391166 107 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 RPL7P25-201ENST00000404151 721 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC096664.2-201ENST00000411843 406 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL121601.2-201ENST00000438019 707 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 WASF1P1-201ENST00000447560 1131 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC079448.1-201ENST00000449377 373 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 PSPHP1-201ENST00000450062 261 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC104472.2-201ENST00000469035 601 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC112204.1-201ENST00000502591 103 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 ARL4AP2-201ENST00000507378 601 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 RN7SKP272-201ENST00000516988 232 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 RNU6-840P-201ENST00000517275 65 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC009812.2-201ENST00000517657 457 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC118273.2-201ENST00000532092 465 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AP000867.2-201ENST00000532468 320 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 OR4T1P-201ENST00000554933 911 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 HMGB1P14-201ENST00000557424 591 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC137800.2-201ENST00000574375 120 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AP000860.1-201ENST00000605250 559 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 ATP5A1P2-202ENST00000616464 443 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL158209.2-201ENST00000619266 216 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL359880.1-201ENST00000621879 266 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AP003122.6-201ENST00000623831 495 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AC068880.5-201ENST00000624331 290 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 AL008636.1-201ENST00000625038 1018 ntBASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DDX43Q9NXZ2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 MIR22-201ENST00000362190 85 ntBASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 SNORA23-201ENST00000365128 182 ntBASIC3.27□□□□□ -1.89
DDX43Q9NXZ2 RNU4-12P-201ENST00000365233 139 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms