Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 RPL23AP84-201ENST00000571193 464 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 MIR5187-201ENST00000583479 76 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AC008521.1-201ENST00000587471 187 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AL022099.1-201ENST00000604551 712 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AL133255.1-201ENST00000606374 441 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AC019176.2-201ENST00000611579 315 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AL357559.1-201ENST00000622228 274 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AC090229.1-201ENST00000590983 1609 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.94□□□□□ -1.78
PNKPQ96T60 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PNKPQ96T60 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PNKPQ96T60 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PNKPQ96T60 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PNKPQ96T60 PNPT1P2-201ENST00000456768 2050 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.93□□□□□ -1.78
PNKPQ96T60 TPTE2P4-201ENST00000258589 1605 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PNKPQ96T60 U3.12-201ENST00000364498 214 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 AC110754.1-201ENST00000399740 601 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 RN7SKP140-201ENST00000411196 284 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 AL035423.1-201ENST00000420331 213 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 FABP5P13-201ENST00000452144 328 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 Y_RNA.632-201ENST00000459189 102 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 RNU7-66P-201ENST00000459469 62 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 RPL7P49-201ENST00000471402 708 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.93□□□□□ -1.78
PNKPQ96T60 AC098591.2-201ENST00000510152 315 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.93□□□□□ -1.78
PNKPQ96T60 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.93□□□□□ -1.78
PNKPQ96T60 AP001804.3-201ENST00000525146 880 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PNKPQ96T60 AC093012.1-202ENST00000549403 582 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.93□□□□□ -1.78
PNKPQ96T60 MIR3942-201ENST00000585264 109 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 DUSP12P1-201ENST00000612874 516 ntBASIC3.93□□□□□ -1.78
PNKPQ96T60 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PNKPQ96T60 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PNKPQ96T60 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
PNKPQ96T60 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PNKPQ96T60 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PNKPQ96T60 AL133412.1-201ENST00000380194 2992 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PNKPQ96T60 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PNKPQ96T60 MIR30E-201ENST00000362104 92 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 RNU6-1252P-201ENST00000363054 104 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 RNA5SP387-201ENST00000364226 106 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 Y_RNA.301-201ENST00000364990 103 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.92□□□□□ -1.78
PNKPQ96T60 Y_RNA.414-201ENST00000384011 101 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 SNORD3H-201ENST00000384486 214 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 Y_RNA.530-201ENST00000384587 101 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PNKPQ96T60 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PNKPQ96T60 SNORA11.1-201ENST00000408133 129 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.92□□□□□ -1.78
PNKPQ96T60 SYF2P2-201ENST00000417620 583 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 ARL5AP1-201ENST00000418991 388 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 NCOR1P3-201ENST00000420479 303 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.92□□□□□ -1.78
PNKPQ96T60 RPL21P8-201ENST00000465083 535 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 RNU6-123P-201ENST00000516163 102 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.92□□□□□ -1.78
PNKPQ96T60 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.92□□□□□ -1.78
PNKPQ96T60 AL121603.1-201ENST00000553815 142 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 BNIP3P25-201ENST00000596023 559 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 AC113139.1-201ENST00000605049 239 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 AL158032.1-201ENST00000605401 106 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.92□□□□□ -1.78
PNKPQ96T60 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PNKPQ96T60 AC084757.4-201ENST00000616350 526 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PNKPQ96T60 AC012314.7-201ENST00000619693 93 ntBASIC3.92□□□□□ -1.78
PNKPQ96T60 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.92□□□□□ -1.78
PNKPQ96T60 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
PNKPQ96T60 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
PNKPQ96T60 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
PNKPQ96T60 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PNKPQ96T60 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PNKPQ96T60 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PNKPQ96T60 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PNKPQ96T60 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PNKPQ96T60 Z73965.1-201ENST00000623412 2297 ntBASIC3.91□□□□□ -1.78
PNKPQ96T60 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PNKPQ96T60 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PNKPQ96T60 RNA5SP42-201ENST00000364278 115 ntBASIC3.91□□□□□ -1.78
PNKPQ96T60 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 405.4 ms