Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RPL21P7-201ENST00000557463 483 ntBASIC4.3□□□□□ -1.72
KLF4O43474 LINC00933-203ENST00000559812 219 ntBASIC4.3□□□□□ -1.72
KLF4O43474 MIR3609-201ENST00000582661 80 ntBASIC4.3□□□□□ -1.72
KLF4O43474 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KLF4O43474 AL627309.6-201ENST00000606857 840 ntBASIC4.3□□□□□ -1.72
KLF4O43474 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KLF4O43474 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
KLF4O43474 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.3□□□□□ -1.72
KLF4O43474 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KLF4O43474 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.3□□□□□ -1.72
KLF4O43474 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLF4O43474 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.3□□□□□ -1.72
KLF4O43474 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.3□□□□□ -1.72
KLF4O43474 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.29□□□□□ -1.72
KLF4O43474 NEAT1-202ENST00000501122 22743 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLF4O43474 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.29□□□□□ -1.72
KLF4O43474 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.29□□□□□ -1.72
KLF4O43474 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KLF4O43474 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KLF4O43474 KPNA2P1-201ENST00000458289 1591 ntBASIC4.29□□□□□ -1.72
KLF4O43474 RNU6-398P-201ENST00000384143 109 ntBASIC4.29□□□□□ -1.72
KLF4O43474 RNU6-790P-201ENST00000384479 105 ntBASIC4.29□□□□□ -1.72
KLF4O43474 RNU6-658P-201ENST00000384606 106 ntBASIC4.29□□□□□ -1.72
KLF4O43474 MIR141-201ENST00000384975 95 ntBASIC4.29□□□□□ -1.72
KLF4O43474 SNORD73A-201ENST00000386062 65 ntBASIC4.29□□□□□ -1.72
KLF4O43474 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLF4O43474 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.29□□□□□ -1.72
KLF4O43474 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.29□□□□□ -1.72
KLF4O43474 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.29□□□□□ -1.72
KLF4O43474 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.29□□□□□ -1.72
KLF4O43474 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.29□□□□□ -1.72
KLF4O43474 AC073264.2-201ENST00000448886 166 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AL031274.1-201ENST00000450334 232 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AL132838.2-201ENST00000492041 314 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.29□□□□□ -1.72
KLF4O43474 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.29□□□□□ -1.72
KLF4O43474 RNA5SP446-201ENST00000515955 82 ntBASIC4.29□□□□□ -1.72
KLF4O43474 RNU6-703P-201ENST00000516946 107 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AP006289.1-201ENST00000538089 277 ntBASIC4.29□□□□□ -1.72
KLF4O43474 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.29□□□□□ -1.72
KLF4O43474 ATP5J2P6-201ENST00000565203 266 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AC022726.1-201ENST00000587475 207 ntBASIC4.29□□□□□ -1.72
KLF4O43474 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.29□□□□□ -1.72
KLF4O43474 AC018462.2-201ENST00000605375 395 ntBASIC4.29□□□□□ -1.72
KLF4O43474 Y_RNA.812-201ENST00000610788 101 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AL591516.1-201ENST00000611326 274 ntBASIC4.29□□□□□ -1.72
KLF4O43474 Y_RNA.784-201ENST00000613803 101 ntBASIC4.29□□□□□ -1.72
KLF4O43474 Y_RNA.787-201ENST00000616522 101 ntBASIC4.29□□□□□ -1.72
KLF4O43474 Y_RNA.780-201ENST00000617336 101 ntBASIC4.29□□□□□ -1.72
KLF4O43474 Y_RNA.801-201ENST00000619005 101 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AC098657.3-201ENST00000620434 263 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AP000346.3-201ENST00000622821 210 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AC244517.12-201ENST00000623581 663 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AC073308.1-201ENST00000623696 305 ntBASIC4.29□□□□□ -1.72
KLF4O43474 SCARNA4-202ENST00000625402 129 ntBASIC4.29□□□□□ -1.72
KLF4O43474 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.29□□□□□ -1.72
KLF4O43474 AL669831.3-213ENST00000636676 183 ntBASIC4.29□□□□□ -1.72
KLF4O43474 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLF4O43474 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.29□□□□□ -1.72
KLF4O43474 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLF4O43474 SRP72P2-201ENST00000344851 1979 ntBASIC4.29□□□□□ -1.72
KLF4O43474 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLF4O43474 AC083843.3-201ENST00000623679 2186 ntBASIC4.29□□□□□ -1.72
KLF4O43474 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.28□□□□□ -1.72
KLF4O43474 RNU1-20P-201ENST00000363314 162 ntBASIC4.28□□□□□ -1.72
KLF4O43474 RNU1-73P-201ENST00000383971 164 ntBASIC4.28□□□□□ -1.72
KLF4O43474 RPS16P5-201ENST00000406501 404 ntBASIC4.28□□□□□ -1.72
KLF4O43474 RNU6-1304P-201ENST00000411374 106 ntBASIC4.28□□□□□ -1.72
KLF4O43474 NDUFS5P4-201ENST00000412983 318 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC114755.2-201ENST00000413520 361 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.28□□□□□ -1.72
KLF4O43474 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.28□□□□□ -1.72
KLF4O43474 AL590664.1-201ENST00000448065 339 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.28□□□□□ -1.72
KLF4O43474 AURKAPS2-201ENST00000454983 333 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.28□□□□□ -1.72
KLF4O43474 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 ELOCP24-201ENST00000456370 334 ntBASIC4.28□□□□□ -1.72
KLF4O43474 RPL30P14-201ENST00000482744 348 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.28□□□□□ -1.72
KLF4O43474 AC006445.2-201ENST00000510061 472 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC113155.1-201ENST00000511141 769 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC093303.1-201ENST00000514549 295 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.28□□□□□ -1.72
KLF4O43474 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.28□□□□□ -1.72
KLF4O43474 AC084783.1-201ENST00000565846 910 ntBASIC4.28□□□□□ -1.72
KLF4O43474 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.28□□□□□ -1.72
KLF4O43474 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.28□□□□□ -1.72
KLF4O43474 RPL7P50-201ENST00000600588 727 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC078795.3-201ENST00000602913 472 ntBASIC4.28□□□□□ -1.72
KLF4O43474 AC008745.1-201ENST00000604064 271 ntBASIC4.28□□□□□ -1.72
KLF4O43474 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLF4O43474 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms