Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC009509.4-201ENST00000619202 509 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC009878.1-201ENST00000621819 340 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC092656.1-203ENST00000624134 423 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC068880.5-201ENST00000624331 290 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 Z82209.1-201ENST00000422141 2135 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC3O15379 AC008669.1-201ENST00000565823 2178 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
HDAC3O15379 AC097714.1-201ENST00000511272 1647 ntBASIC2.65□□□□□ -1.98
HDAC3O15379 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC3O15379 RNU6-28P-201ENST00000362378 107 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 RNA5SP258-201ENST00000362750 119 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 RNU6-623P-201ENST00000363143 105 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 Y_RNA.559-201ENST00000384686 107 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 MIR320C1-201ENST00000408566 88 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 RPS27AP14-201ENST00000422868 454 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC3O15379 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC3O15379 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 EZH2P1-201ENST00000431167 291 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC3O15379 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC3O15379 AL671855.1-201ENST00000446875 1203 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 AC027673.1-201ENST00000456245 405 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC3O15379 CBX3P3-201ENST00000508108 532 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC3O15379 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC3O15379 MTND3P5-201ENST00000512798 333 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 RNU1-104P-201ENST00000517280 175 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC3O15379 AP002748.2-201ENST00000528671 348 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.65□□□□□ -1.99
HDAC3O15379 AC022880.1-201ENST00000534017 973 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 PCMTD1P2-201ENST00000565017 355 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC087481.2-201ENST00000565492 330 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC3O15379 MIR4307-201ENST00000582802 84 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 MIR5195-201ENST00000583555 115 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 AC008739.2-201ENST00000597006 317 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC024153.1-201ENST00000603103 365 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AC025594.3-201ENST00000613068 790 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AL596245.1-201ENST00000618994 362 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC3O15379 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 AL356473.1-201ENST00000406203 1408 ntBASIC2.65□□□□□ -1.99
HDAC3O15379 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC3O15379 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC3O15379 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
HDAC3O15379 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC3O15379 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC3O15379 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 OR5H15-201ENST00000383696 930 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 DEFB108C-201ENST00000400154 252 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 MTCO2P5-201ENST00000422621 426 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 MTCO3P5-201ENST00000433620 714 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 MTND1P28-201ENST00000435623 950 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 SDCBPP1-201ENST00000440192 890 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL031667.1-201ENST00000440222 725 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 RPS3AP12-201ENST00000443616 753 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 BMI1P1-201ENST00000445879 941 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL353691.1-201ENST00000451332 387 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 RNU6-956P-201ENST00000458868 103 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AP000797.1-201ENST00000478870 387 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 CDC42P4-201ENST00000510507 563 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC079140.3-201ENST00000511111 550 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 SNORA70.24-201ENST00000517233 118 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC3O15379 AP003033.1-201ENST00000527244 415 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 OR4P1P-201ENST00000530808 1136 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC068587.4-201ENST00000533893 186 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms