Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB9Q9Y5E1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PCDHB9Q9Y5E1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB9Q9Y5E1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHB9Q9Y5E1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB9Q9Y5E1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AL365440.1-201ENST00000436135 2167 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AL139811.1-201ENST00000424779 2299 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RNU6-428P-201ENST00000362942 107 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 SNORD113-8-201ENST00000363497 74 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 SNORD113-1-201ENST00000365321 69 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 Y_RNA.602-201ENST00000410535 92 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 OR4C10P-201ENST00000434991 931 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC107393.1-201ENST00000512403 346 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RNA5SP373-201ENST00000517271 95 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC107918.3-201ENST00000533272 382 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC004024.1-201ENST00000549244 247 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 MIR4330-201ENST00000579077 105 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RN7SL52P-201ENST00000584271 284 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 FAM25E-202ENST00000608562 189 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RN7SL722P-201ENST00000617780 284 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RN7SL565P-201ENST00000618246 284 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AL450326.2-201ENST00000421913 1962 ntBASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB9Q9Y5E1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 DEFB108F-201ENST00000344638 222 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 RNU6-1159P-201ENST00000362933 107 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 SNORD78.2-201ENST00000391076 69 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 RNU2-20P-201ENST00000410425 191 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 Z85995.1-201ENST00000415547 335 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 NDUFB4P10-201ENST00000452541 359 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 snoU13.20-201ENST00000459180 104 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 RPL7P49-201ENST00000471402 708 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 SCARNA15.2-201ENST00000516409 127 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 FAM60BP-201ENST00000578364 658 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 AC234771.5-201ENST00000600161 514 ntBASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB9Q9Y5E1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 AC022893.2-201ENST00000564832 3296 ntBASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHB9Q9Y5E1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms