Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC091925.2-201ENST00000625059 256 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 CR381572.1-201ENST00000625098 102 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC3O15379 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HDAC3O15379 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
HDAC3O15379 RNU6-501P-201ENST00000364072 100 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 RNU6-744P-201ENST00000365557 107 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 RNU6-1316P-201ENST00000384242 108 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 RNU6-769P-201ENST00000384407 104 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 RNU6-878P-201ENST00000384578 110 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 U8.14-201ENST00000390843 143 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MTCYBP36-201ENST00000404146 440 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC3O15379 AC080125.1-201ENST00000414888 684 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC3O15379 TMEM167AP1-201ENST00000423409 219 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MED14P1-201ENST00000430517 648 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC3O15379 SNRPEP7-201ENST00000438350 220 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 RN7SL807P-201ENST00000470923 297 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HDAC3O15379 MTND4P2-201ENST00000507767 1203 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC034159.1-201ENST00000513885 583 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC3O15379 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC3O15379 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC3O15379 AP004247.1-201ENST00000531556 1289 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.67□□□□□ -1.98
HDAC3O15379 AC004486.1-201ENST00000546846 233 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC091489.2-201ENST00000566263 604 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AGGF1P4-201ENST00000568249 801 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC009163.5-201ENST00000575421 637 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MIR3670-2-201ENST00000582974 65 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MIR3670-1-201ENST00000584160 65 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MIR3670-3-201ENST00000584855 65 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC3O15379 AC012065.4-201ENST00000602445 679 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC008277.2-201ENST00000605196 797 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC3O15379 AC080013.4-201ENST00000607624 649 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 MIR3670-4-201ENST00000612260 65 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC3O15379 AL442067.2-201ENST00000614033 363 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AL357080.1-201ENST00000617394 239 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HDAC3O15379 AC000403.1-201ENST00000613696 3585 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 AC073346.2-201ENST00000624724 2058 ntBASIC2.67□□□□□ -1.98
HDAC3O15379 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC3O15379 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.66□□□□□ -1.98
HDAC3O15379 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC3O15379 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC3O15379 SNORA38.1-201ENST00000364172 131 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 Y_RNA.234-201ENST00000364409 97 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 Y_RNA.359-201ENST00000365498 102 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC3O15379 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HDAC3O15379 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 SNORA11.1-201ENST00000408133 129 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 RN7SKP266-201ENST00000410232 287 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 RNU2-15P-201ENST00000410692 191 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 RNU4-78P-201ENST00000410940 126 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 MTATP6P27-201ENST00000416987 621 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 MTCO2P34-201ENST00000421994 607 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC3O15379 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.66□□□□□ -1.98
HDAC3O15379 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC3O15379 RPS20P5-201ENST00000434808 360 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AL831737.1-201ENST00000441288 271 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 USP9YP29-201ENST00000445112 563 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 COX6CP12-201ENST00000446748 202 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.66□□□□□ -1.98
HDAC3O15379 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC3O15379 AP000705.1-201ENST00000454567 350 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 SNRPGP9-201ENST00000456025 225 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 SUMO2P2-201ENST00000456482 255 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 RPS20P24-201ENST00000457473 361 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 AP001992.1-205ENST00000462248 379 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC090525.1-201ENST00000479116 478 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 RPL37P25-201ENST00000507308 276 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC024589.1-201ENST00000512207 263 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 TBCAP3-201ENST00000512475 312 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.66□□□□□ -1.98
HDAC3O15379 AP002404.1-201ENST00000532005 451 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC3O15379 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 H3F3AP1-201ENST00000559984 334 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC3O15379 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 HULC.1-201ENST00000612720 240 ntBASIC2.66□□□□□ -1.98
HDAC3O15379 AC104010.1-201ENST00000616889 150 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms