Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.07□□□□□ -1.76
PNKPQ96T60 AC243960.4-201ENST00000600532 288 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 RNU6-89P-201ENST00000606519 100 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC130324.3-201ENST00000614165 542 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AL121772.2-201ENST00000614331 297 ntBASIC4.07□□□□□ -1.76
PNKPQ96T60 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.07□□□□□ -1.76
PNKPQ96T60 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PNKPQ96T60 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 Y_RNA.58-201ENST00000362807 102 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 Y_RNA.154-201ENST00000363624 102 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 Y_RNA.231-201ENST00000364358 102 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 RNY3P1-201ENST00000365085 102 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 RNY3-201ENST00000365484 102 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 Y_RNA.490-201ENST00000384413 102 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 MIR184-201ENST00000384962 84 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 MIR449B-201ENST00000384995 97 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PNKPQ96T60 UBE2V1P2-201ENST00000397758 440 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AL109755.1-201ENST00000401791 649 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 SNORA3.3-201ENST00000408712 125 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 RN7SKP32-201ENST00000410167 303 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 RNU6-193P-201ENST00000410977 107 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC009161.1-201ENST00000417306 376 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 RANP8-201ENST00000444720 713 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 MTND1P18-201ENST00000448191 573 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.06□□□□□ -1.76
PNKPQ96T60 AL118520.1-201ENST00000450770 291 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.06□□□□□ -1.76
PNKPQ96T60 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.06□□□□□ -1.76
PNKPQ96T60 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.06□□□□□ -1.76
PNKPQ96T60 RNU6-1314P-201ENST00000517139 104 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC105029.1-201ENST00000520250 669 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.06□□□□□ -1.76
PNKPQ96T60 HPRT1P3-201ENST00000539521 576 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.06□□□□□ -1.76
PNKPQ96T60 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.06□□□□□ -1.76
PNKPQ96T60 AC024220.1-201ENST00000603675 484 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 RNVU1-4-201ENST00000612985 164 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AC093913.1-201ENST00000614178 329 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 AP003400.5-201ENST00000624827 617 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.06□□□□□ -1.76
PNKPQ96T60 MTND1P37-201ENST00000636562 264 ntBASIC4.06□□□□□ -1.76
PNKPQ96T60 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.06□□□□□ -1.76
PNKPQ96T60 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
PNKPQ96T60 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PNKPQ96T60 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PNKPQ96T60 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PNKPQ96T60 MTND4P23-201ENST00000447723 1363 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AC106871.1-201ENST00000568324 3102 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PNKPQ96T60 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PNKPQ96T60 AC073343.1-201ENST00000328239 651 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RNA5SP124-201ENST00000362739 110 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RNU4-79P-201ENST00000362764 141 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RNU4-66P-201ENST00000365199 138 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.05□□□□□ -1.76
PNKPQ96T60 RNU6-116P-201ENST00000384042 109 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 MIR514A2-201ENST00000385131 88 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 MIR514A3-201ENST00000385132 88 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RAB9AP3-201ENST00000412737 573 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RPS20P15-201ENST00000412792 311 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RPL7AP73-201ENST00000413490 353 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.05□□□□□ -1.76
PNKPQ96T60 AC006946.1-201ENST00000429106 328 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 ERLEC1P1-201ENST00000433806 578 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 IFNA20P-201ENST00000436840 528 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PNKPQ96T60 RPL29P29-201ENST00000448725 423 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RAB9AP1-201ENST00000449393 573 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.05□□□□□ -1.76
PNKPQ96T60 AC084198.1-201ENST00000477747 402 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RPL21P99-201ENST00000480369 423 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.05□□□□□ -1.76
PNKPQ96T60 RNA5SP503-201ENST00000517047 117 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.05□□□□□ -1.76
PNKPQ96T60 AC087241.2-201ENST00000535801 324 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 BNIP3P6-201ENST00000549284 499 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 SCOCP1-201ENST00000554676 349 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 MIR4458-201ENST00000578872 75 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 MIR4644-201ENST00000579929 84 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.05□□□□□ -1.76
PNKPQ96T60 AC006254.3-201ENST00000603353 884 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AL442067.2-201ENST00000614033 363 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AL603758.1-201ENST00000618654 241 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 RMST_7.1-201ENST00000621935 268 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 AC011155.2-201ENST00000623202 216 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 TPTEP1-208ENST00000636884 213 ntBASIC4.05□□□□□ -1.76
PNKPQ96T60 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PNKPQ96T60 PRO1804-201ENST00000623780 2050 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms