Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 Y_RNA.194-201ENST00000363985 102 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
HDAC3O15379 RNU6-761P-201ENST00000384148 107 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 RNA5SP252-201ENST00000391131 119 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 SNORA48.5-201ENST00000391143 135 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HDAC3O15379 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC006366.1-201ENST00000422002 759 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 CYCSP46-201ENST00000423569 204 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC3O15379 AL512649.1-201ENST00000428997 581 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AL365184.2-201ENST00000431139 435 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 MTND1P30-201ENST00000441241 901 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AC112653.1-201ENST00000443851 386 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.69□□□□□ -1.98
HDAC3O15379 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC023424.2-201ENST00000493479 777 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC091826.1-201ENST00000514065 313 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 RNU6-27P-201ENST00000516146 107 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 SCARNA13-201ENST00000516672 275 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC022861.1-201ENST00000522981 663 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HDAC3O15379 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.69□□□□□ -1.98
HDAC3O15379 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HDAC3O15379 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HDAC3O15379 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.69□□□□□ -1.98
HDAC3O15379 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC3O15379 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HDAC3O15379 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.69□□□□□ -1.98
HDAC3O15379 MIR544B-201ENST00000582372 78 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.69□□□□□ -1.98
HDAC3O15379 MIR548AB-201ENST00000584917 84 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC3O15379 BBIP1P1-201ENST00000602999 279 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 RPL23AP92-201ENST00000603609 255 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AC090186.1-201ENST00000605991 572 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 RNU6-88P-201ENST00000606801 100 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 SNHG22-203ENST00000617833 660 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC3O15379 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.69□□□□□ -1.98
HDAC3O15379 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.69□□□□□ -1.98
HDAC3O15379 AC090582.1-201ENST00000636321 199 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 AC006927.3-201ENST00000638789 384 ntBASIC2.69□□□□□ -1.98
HDAC3O15379 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC3O15379 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC3O15379 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
HDAC3O15379 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC3O15379 RNVU1-3-201ENST00000364313 161 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 Y_RNA.553-201ENST00000384670 102 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 RN7SKP142-201ENST00000411236 328 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.68□□□□□ -1.98
HDAC3O15379 RPS15AP38-201ENST00000413110 372 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 HMGB1P11-201ENST00000413899 637 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 Z99497.1-201ENST00000421282 135 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC006548.1-201ENST00000427470 102 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AL512286.1-201ENST00000439244 400 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.68□□□□□ -1.98
HDAC3O15379 GDI2P2-201ENST00000445131 608 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AP000542.1-201ENST00000448473 371 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AC092798.1-201ENST00000458542 409 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AP000852.1-201ENST00000472460 573 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AC083906.5-201ENST00000503722 328 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 RAC1P5-201ENST00000512182 576 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 RNA5SP216-201ENST00000516111 123 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC006362.1-201ENST00000567392 174 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC012213.3-201ENST00000577199 777 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC3O15379 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.68□□□□□ -1.98
HDAC3O15379 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.68□□□□□ -1.98
HDAC3O15379 BNIP3P23-201ENST00000599655 511 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AP000403.1-201ENST00000603349 851 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AL161756.2-201ENST00000604597 246 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC3O15379 AC012557.2-201ENST00000605919 418 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 BX664608.1-201ENST00000610519 487 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 AC006329.2-201ENST00000611491 394 ntBASIC2.68□□□□□ -1.98
HDAC3O15379 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms