Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 EIF1P1-201ENST00000421436 341 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 CST9LP2-201ENST00000437612 320 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 FTH1P1-201ENST00000437933 532 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 SNORD121B-201ENST00000458838 81 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC109464.2-201ENST00000510242 943 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 MIR2682-201ENST00000580305 110 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC006566.1-201ENST00000608943 513 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 AC104010.1-201ENST00000616889 150 ntBASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX43Q9NXZ2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 MTND5P26-201ENST00000426018 1752 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 OR4G2P-201ENST00000328113 903 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 RNY4P24-201ENST00000362735 96 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 SNORD56.3-201ENST00000363507 71 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 USP9YP36-201ENST00000424581 829 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 MRPS10P2-201ENST00000431226 381 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 RPL26P6-201ENST00000440913 438 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 GDI2P2-201ENST00000445131 608 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC115115.1-201ENST00000449927 248 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC003071.1-201ENST00000451219 789 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 FGF7P6-202ENST00000451282 293 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 POU5F1P7-201ENST00000508759 541 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AL359273.1-201ENST00000510918 627 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC024589.1-201ENST00000512207 263 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC116347.2-201ENST00000514912 523 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 RNU6-1178P-201ENST00000516674 107 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC025881.1-201ENST00000518851 512 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC105224.1-201ENST00000587055 421 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AP001429.1-201ENST00000602568 530 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AL450472.3-201ENST00000615578 367 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC027807.2-201ENST00000616099 408 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 MIR6076-201ENST00000617521 113 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX43Q9NXZ2 RNA5SP374-201ENST00000362939 125 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RNU6-97P-201ENST00000363387 104 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RNU6-777P-201ENST00000364265 104 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 Y_RNA.548-201ENST00000384656 105 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 Y_RNA.582-201ENST00000391023 95 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RPS4XP3-201ENST00000398541 413 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 MIR1290-201ENST00000408735 78 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 HMGN1P14-201ENST00000412459 517 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RPS27AP14-201ENST00000422868 454 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 TMEM167AP1-201ENST00000423409 219 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 MTCO1P27-201ENST00000448269 226 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AL359385.1-201ENST00000456509 365 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RN7SL863P-201ENST00000462370 296 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC004924.1-201ENST00000480160 781 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AC026801.2-201ENST00000515352 425 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RNA5SP216-201ENST00000516111 123 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 RNU6-711P-201ENST00000517255 106 ntBASIC3.42□□□□□ -1.86
DDX43Q9NXZ2 AP000889.1-201ENST00000530968 660 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms