Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.05□□□□□ -1.6
NFKB1P19838 AC012158.1-204ENST00000483430 465 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.05□□□□□ -1.6
NFKB1P19838 RN7SL244P-201ENST00000493405 297 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 RPS23P5-201ENST00000495419 428 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.05□□□□□ -1.6
NFKB1P19838 AC004980.4-201ENST00000513375 203 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 DEFB108E-201ENST00000524692 240 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 FKBP1BP1-201ENST00000553366 325 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 MIR3133-201ENST00000583157 78 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 BDH2P1-201ENST00000602288 736 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 BX284668.6-201ENST00000606899 438 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 AC093799.2-201ENST00000610062 578 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.05□□□□□ -1.6
NFKB1P19838 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 AL731532.2-201ENST00000623542 1953 ntBASIC5.05□□□□□ -1.6
NFKB1P19838 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NFKB1P19838 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NFKB1P19838 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
NFKB1P19838 Z75746.1-201ENST00000440243 2080 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NFKB1P19838 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NFKB1P19838 SMG1P4-204ENST00000523028 4131 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NFKB1P19838 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 Y_RNA.27-201ENST00000362540 103 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 snoU2_19.2-201ENST00000363024 80 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 SNORD81.1-201ENST00000363064 77 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 Y_RNA.200-201ENST00000364018 102 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 RNU6-1317P-201ENST00000364582 104 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 RPL7AP73-201ENST00000413490 353 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 AF186996.5-201ENST00000418098 904 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.04□□□□□ -1.6
NFKB1P19838 RANP8-201ENST00000444720 713 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 RNU6-1037P-201ENST00000459571 107 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.04□□□□□ -1.6
NFKB1P19838 RN7SL629P-201ENST00000489622 285 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.04□□□□□ -1.6
NFKB1P19838 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.04□□□□□ -1.6
NFKB1P19838 Y_RNA.703-201ENST00000516846 111 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 Y_RNA.713-201ENST00000517013 96 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 SNORA31.22-201ENST00000517204 135 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.04□□□□□ -1.6
NFKB1P19838 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.04□□□□□ -1.6
NFKB1P19838 AP001005.3-201ENST00000622049 129 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 AL450472.1-202ENST00000637286 180 ntBASIC5.04□□□□□ -1.6
NFKB1P19838 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NFKB1P19838 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NFKB1P19838 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NFKB1P19838 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NFKB1P19838 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NFKB1P19838 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NFKB1P19838 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NFKB1P19838 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NFKB1P19838 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NFKB1P19838 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.03□□□□□ -1.6
NFKB1P19838 RLIMP1-201ENST00000339626 1680 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NFKB1P19838 RNU6-545P-201ENST00000362681 104 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 Y_RNA.54-201ENST00000362766 105 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 Y_RNA.458-201ENST00000384240 102 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RNU6-146P-201ENST00000384602 108 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RNU6-1179P-201ENST00000384667 107 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 MRPL35P1-201ENST00000404272 572 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RNU4-78P-201ENST00000410940 126 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.03□□□□□ -1.6
NFKB1P19838 BX510359.3-201ENST00000422168 306 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 TPT1P13-201ENST00000449760 499 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RPL30P10-201ENST00000488148 337 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.03□□□□□ -1.6
NFKB1P19838 SUMO2P6-201ENST00000505273 288 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AC074250.1-201ENST00000511117 192 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.03□□□□□ -1.6
NFKB1P19838 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.03□□□□□ -1.6
NFKB1P19838 RNU1-86P-201ENST00000516108 154 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RNU1-107P-201ENST00000516617 154 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 RNU6-1212P-201ENST00000517023 104 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AC005951.2-201ENST00000576282 495 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AC015914.2-201ENST00000618167 288 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.03□□□□□ -1.6
NFKB1P19838 AC019206.1-201ENST00000621938 425 ntBASIC5.03□□□□□ -1.6
NFKB1P19838 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.03□□□□□ -1.6
NFKB1P19838 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.03□□□□□ -1.6
NFKB1P19838 AC009643.2-201ENST00000603543 1448 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms