Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC005592.1-201ENST00000566527 1640 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EPHB3P54753 BDP1P-201ENST00000582658 1990 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EPHB3P54753 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.6□□□□□ -1.67
EPHB3P54753 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.59□□□□□ -1.67
EPHB3P54753 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 RNA5SP175-201ENST00000364275 119 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 RNA5SP515-201ENST00000364570 118 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 RNU6-61P-201ENST00000365528 109 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 DDX18P3-201ENST00000404856 2007 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.59□□□□□ -1.67
EPHB3P54753 RPL7P46-201ENST00000425129 740 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 HMGB3P21-201ENST00000452483 547 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 RNU7-59P-201ENST00000459101 61 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 RPS20P21-201ENST00000466859 343 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
EPHB3P54753 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
EPHB3P54753 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 AC008958.1-201ENST00000511047 682 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 AC104057.1-201ENST00000515547 497 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 Y_RNA.721-201ENST00000517207 102 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EPHB3P54753 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.59□□□□□ -1.67
EPHB3P54753 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.59□□□□□ -1.67
EPHB3P54753 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.59□□□□□ -1.67
EPHB3P54753 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 U2.1-201ENST00000618978 145 ntBASIC4.59□□□□□ -1.67
EPHB3P54753 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.59□□□□□ -1.67
EPHB3P54753 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
EPHB3P54753 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
EPHB3P54753 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
EPHB3P54753 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.59□□□□□ -1.68
EPHB3P54753 CDC27P3-201ENST00000635418 1910 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
EPHB3P54753 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.58□□□□□ -1.68
EPHB3P54753 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
EPHB3P54753 TPTE2P4-201ENST00000258589 1605 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC032011.1-201ENST00000611703 1549 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 RNU1-94P-201ENST00000362627 173 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 RNU6-490P-201ENST00000362985 107 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 Y_RNA.126-201ENST00000363382 111 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EPHB3P54753 Y_RNA.576-201ENST00000384781 102 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 RNU6-278P-201ENST00000390945 109 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AL022722.2-201ENST00000402519 180 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 NDUFS5P1-201ENST00000405668 289 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 RNU2-36P-201ENST00000410361 191 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 HMGN1P24-201ENST00000412282 298 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 COX6CP15-201ENST00000426313 211 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.58□□□□□ -1.68
EPHB3P54753 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 AC105402.2-201ENST00000438503 358 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.58□□□□□ -1.68
EPHB3P54753 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.58□□□□□ -1.68
EPHB3P54753 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 AL162388.1-201ENST00000450912 352 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 SNORD121B-201ENST00000458838 81 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.58□□□□□ -1.68
EPHB3P54753 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 HIGD1AP13-201ENST00000509878 289 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.58□□□□□ -1.68
EPHB3P54753 Y_RNA.708-201ENST00000516950 96 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC022882.1-201ENST00000532142 501 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.58□□□□□ -1.68
EPHB3P54753 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.58□□□□□ -1.68
EPHB3P54753 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
EPHB3P54753 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 VN1R85P-201ENST00000601587 426 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AL021997.2-201ENST00000615674 271 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 PISRT1.1-201ENST00000616930 107 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 MIR8059-201ENST00000620427 81 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC078938.1-201ENST00000620993 318 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AC055839.1-201ENST00000634467 498 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 MIR492-201ENST00000638676 116 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 AL732372.2-225ENST00000642124 456 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EPHB3P54753 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EPHB3P54753 AC103710.2-202ENST00000641454 2853 ntBASIC4.58□□□□□ -1.68
EPHB3P54753 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms