Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RPL36AP6-201ENST00000435770 321 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC129850.1-201ENST00000436203 508 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AL513043.1-201ENST00000439124 535 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.75□□□□□ -1.97
HDAC3O15379 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.75□□□□□ -1.97
HDAC3O15379 AL360221.1-201ENST00000445989 335 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 EPS15P1-201ENST00000448836 336 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 KATNBL1P6-201ENST00000453433 915 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 BX322784.1-201ENST00000455793 1077 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AL031183.1-201ENST00000457667 207 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 MTND4LP3-201ENST00000468320 276 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC109486.1-201ENST00000486833 374 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC114981.1-201ENST00000503897 678 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.75□□□□□ -1.97
HDAC3O15379 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.75□□□□□ -1.97
HDAC3O15379 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.75□□□□□ -1.97
HDAC3O15379 AC008885.1-201ENST00000514930 301 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 RN7SKP40-201ENST00000517211 242 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
HDAC3O15379 AP001804.3-201ENST00000525146 880 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC3O15379 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.75□□□□□ -1.97
HDAC3O15379 AC103987.3-201ENST00000582071 292 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 AF131215.7-201ENST00000602443 707 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AL355812.1-201ENST00000603215 216 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 DUXAP11-201ENST00000603858 526 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC007179.3-201ENST00000604976 235 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 AC106028.5-201ENST00000610332 395 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 CR381653.2-201ENST00000624041 768 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 CYP3A51P-201ENST00000633513 256 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 AC009487.2-201ENST00000420969 6821 ntBASIC2.75□□□□□ -1.97
HDAC3O15379 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC3O15379 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.75□□□□□ -1.97
HDAC3O15379 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC3O15379 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC3O15379 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDAC3O15379 Y_RNA.77-201ENST00000362962 107 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 RNU6-289P-201ENST00000364093 107 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 RNA5SP387-201ENST00000364226 106 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 RNU4-24P-201ENST00000364565 139 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 RNU4-75P-201ENST00000364621 146 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 MIR627-201ENST00000384979 97 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 U3.29-201ENST00000391296 212 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 RNA5SP56-201ENST00000410277 118 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 OFD1P18Y-201ENST00000420889 959 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AL158156.1-201ENST00000422509 473 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.74□□□□□ -1.97
HDAC3O15379 DLGAP5P1-201ENST00000430307 464 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 MTND5P14-201ENST00000441481 1267 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.74□□□□□ -1.97
HDAC3O15379 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDAC3O15379 MRPL50P4-201ENST00000446432 475 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.74□□□□□ -1.97
HDAC3O15379 RPL31P50-201ENST00000471002 296 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 AL358832.1-201ENST00000497800 389 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.74□□□□□ -1.97
HDAC3O15379 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDAC3O15379 Y_RNA.655-201ENST00000515919 96 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.74□□□□□ -1.97
HDAC3O15379 OR6C7P-201ENST00000547875 934 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 AL121603.1-201ENST00000553815 142 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 ACTR3BP3-201ENST00000565577 979 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AL669831.4-202ENST00000590817 238 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 U73023.1-201ENST00000603134 700 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 MTCYBP22-201ENST00000603788 447 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC092140.2-201ENST00000618027 521 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC3O15379 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.74□□□□□ -1.97
HDAC3O15379 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.74□□□□□ -1.97
HDAC3O15379 AL390237.1-201ENST00000404226 1415 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC092104.1-201ENST00000497346 1441 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 MTND5P1-201ENST00000445440 1375 ntBASIC2.74□□□□□ -1.97
HDAC3O15379 AC096644.4-201ENST00000563417 2912 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC011460.1-201ENST00000636268 1834 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HDAC3O15379 RNU4-21P-201ENST00000362802 126 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 RNU6-263P-201ENST00000363811 107 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 Y_RNA.201-201ENST00000364052 96 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 Y_RNA.493-201ENST00000384422 102 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 RNU6-851P-201ENST00000384565 107 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC092447.6-201ENST00000414578 210 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 RPL23AP39-201ENST00000415533 405 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 238.8 ms