Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 DPPA3P1-201ENST00000448050 469 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC233279.1-201ENST00000455300 423 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 RPL30P9-201ENST00000465586 330 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 RPS20P22-201ENST00000473700 357 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC069528.1-202ENST00000482888 637 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 EIF4EP3-201ENST00000498782 656 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 SNORA31.18-201ENST00000517043 134 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC109329.2-201ENST00000519658 482 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AP003497.1-201ENST00000528472 562 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC087241.2-201ENST00000535801 324 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC092451.2-201ENST00000538746 658 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 MIR3117-201ENST00000584034 78 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AL355877.2-201ENST00000603670 358 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 AC024060.1-201ENST00000607052 494 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 MTND1P37-201ENST00000636562 264 ntBASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCNB1IP1Q9NPC3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 FTLP6-201ENST00000355274 422 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 RNU4-51P-201ENST00000364206 140 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 SNORA40.2-201ENST00000390847 128 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 RNA5SP21-201ENST00000410917 96 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AL592148.1-201ENST00000413568 445 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC019070.1-201ENST00000415008 1024 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 Z82209.1-201ENST00000422141 2135 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 BX119904.4-201ENST00000424402 301 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 ZNF863P-201ENST00000426746 417 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 HMGN1P5-201ENST00000448591 263 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC097493.1-201ENST00000463958 372 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 MRPS17P3-201ENST00000465453 385 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 COX6CP8-201ENST00000522620 226 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 OR4R1P-201ENST00000529879 463 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 CYCSP39-201ENST00000565821 309 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 MIR3616-201ENST00000584070 92 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 ELOCP29-201ENST00000588193 334 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 FTX_3.1-201ENST00000610451 147 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC006386.2-201ENST00000624491 75 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 AC012005.1-201ENST00000624575 75 ntBASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
CCNB1IP1Q9NPC3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 SNORA23-201ENST00000365128 182 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 RNU6-224P-201ENST00000384055 107 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AL162578.1-201ENST00000406202 378 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 RPS4XP7-201ENST00000406274 780 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 Z75741.2-201ENST00000417272 1167 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC107083.1-201ENST00000439643 279 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC011816.1-201ENST00000441346 546 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC002381.1-201ENST00000447049 280 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 MTND1P9-201ENST00000453775 944 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 RPL36AP51-201ENST00000487216 318 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC069306.1-201ENST00000507006 843 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 RNA5SP291-201ENST00000517222 105 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.36□□□□□ -2.03
CCNB1IP1Q9NPC3 AC005832.3-201ENST00000537929 631 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms