Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 RNA5SP27-201ENST00000363839 119 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 U8.14-201ENST00000390843 143 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL356057.1-202ENST00000402263 756 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL450338.1-201ENST00000407987 512 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 RNU2-15P-201ENST00000410692 191 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC023141.4-201ENST00000412031 328 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 RPL17P12-201ENST00000413391 526 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL445685.2-201ENST00000422551 342 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AIMP1P2-201ENST00000425294 312 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC027124.2-201ENST00000428249 105 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL136380.1-201ENST00000447970 162 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC118273.2-201ENST00000532092 465 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC084033.1-201ENST00000550830 633 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL133241.1-201ENST00000556832 487 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 ATP5F1P7-201ENST00000567330 760 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 MIR4529-201ENST00000578110 78 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 MIR3200-201ENST00000580767 85 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC022387.2-201ENST00000604050 448 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 DUXAP9-208ENST00000622815 614 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AC007998.5-201ENST00000622938 237 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 AP003400.5-201ENST00000624827 617 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 MIR7157-201ENST00000635801 60 ntBASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV13-1A0A0B4J241 GDI2P1-201ENST00000429312 1336 ntBASIC1.4□□□□□ -2.18
TRAV13-1A0A0B4J241 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
TRAV13-1A0A0B4J241 HSPA8P4-201ENST00000511877 1920 ntBASIC1.4□□□□□ -2.18
TRAV13-1A0A0B4J241 AP006437.1-201ENST00000641440 3685 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 ANKRD36P1-201ENST00000344424 659 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RNA5SP289-201ENST00000362332 137 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RNU5A-1-201ENST00000362698 116 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 SNORA70.4-201ENST00000365509 134 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 MIR218-1-201ENST00000384999 110 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RNU6-750P-201ENST00000390946 107 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 NDUFB4P4-201ENST00000404822 243 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RN7SKP158-201ENST00000410453 326 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RNU2-49P-201ENST00000410666 184 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 BEND7P1-201ENST00000422058 457 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC003685.2-201ENST00000422795 395 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RPL31P54-201ENST00000429803 370 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RPS15AP5-201ENST00000436276 388 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AL353689.1-201ENST00000438895 199 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 USP9YP8-201ENST00000441913 500 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AL500527.1-201ENST00000448532 255 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RPL21P134-201ENST00000453468 483 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RPL23AP3-201ENST00000453844 468 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 RPL23AP41-201ENST00000484754 458 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC107032.1-201ENST00000485945 480 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 LARP1BP2-201ENST00000486594 519 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC096571.1-202ENST00000506634 735 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC098591.2-201ENST00000510152 315 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC114781.4-201ENST00000513707 639 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 SCARNA3-201ENST00000517097 143 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 CR383656.7-201ENST00000548164 174 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 MIR4299-201ENST00000577899 72 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AL355297.2-201ENST00000604792 129 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 BNIP3P4-201ENST00000604946 565 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC080013.4-201ENST00000607624 649 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC005296.1-201ENST00000616145 209 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC010378.1-201ENST00000619270 362 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC244517.12-201ENST00000623581 663 ntBASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
TRAV13-1A0A0B4J241 AC006020.1-201ENST00000420179 1854 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 AL390862.1-201ENST00000635467 1469 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 RNU1-73P-201ENST00000383971 164 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 SUMO2P12-201ENST00000405924 140 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 RNU6-77P-201ENST00000410554 91 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 RNU2-47P-201ENST00000410649 186 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 Z92545.1-201ENST00000411782 234 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 SNORD56-201ENST00000413522 71 ntBASIC1.39□□□□□ -2.19
TRAV13-1A0A0B4J241 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms