Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 FGF7P2-201ENST00000332473 296 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 Y_RNA.6-201ENST00000362350 114 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RNA5SP88-201ENST00000365560 109 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RNU6-348P-201ENST00000384386 107 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 MIR483-201ENST00000385070 76 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RNU2-43P-201ENST00000410306 190 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC109780.2-201ENST00000413467 845 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC063979.1-201ENST00000415539 377 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 UBE2FP3-201ENST00000436366 524 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RPL9P33-201ENST00000484311 566 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 FAM172BP-201ENST00000487497 1089 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RNA5SP380-201ENST00000517190 98 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 SNORA70.24-201ENST00000517233 118 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 OR4K8P-201ENST00000578842 1048 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AL596327.1-201ENST00000603629 213 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AL445264.1-201ENST00000621719 171 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC110801.1-201ENST00000623590 212 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC068137.3-201ENST00000639191 341 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC073869.6-201ENST00000640656 341 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 RNU6-952P-201ENST00000391164 108 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MTCYBP5-201ENST00000423752 1135 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 RPL23AP82-202ENST00000427528 469 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AL365184.2-201ENST00000431139 435 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 Z75741.1-201ENST00000446793 314 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC110794.1-201ENST00000505816 425 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC093677.1-201ENST00000514414 678 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MTND4LP26-201ENST00000518144 282 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AP001804.3-201ENST00000525146 880 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 OR5G4P-201ENST00000525251 760 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC016957.1-201ENST00000534895 309 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC004024.1-201ENST00000549244 247 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 RBM11P1-201ENST00000604951 799 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC108747.1-201ENST00000609508 535 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC008498.1-201ENST00000613012 531 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AC116165.2-201ENST00000616705 206 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 AL160394.1-201ENST00000624765 724 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MIR3651-201ENST00000630427 90 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 MTND5P27-201ENST00000428871 1720 ntBASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX43Q9NXZ2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 RNU1-70P-201ENST00000362618 164 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 SNORA38.1-201ENST00000364172 131 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 RNU6-1283P-201ENST00000365314 105 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 MIR491-201ENST00000384877 84 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AL357075.1-201ENST00000404107 726 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 FCF1P9-201ENST00000412546 282 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 HMGB3P23-201ENST00000414981 585 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AL953862.1-201ENST00000423016 168 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 SSXP1-201ENST00000453640 473 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 RPL31P50-201ENST00000471002 296 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 FABP5P5-201ENST00000515537 406 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 RNU6-150P-201ENST00000516237 95 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC103783.1-201ENST00000520506 373 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC022690.1-201ENST00000526681 550 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms