Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.15□□□□□ -1.59
NFKB1P19838 OR4H12P-201ENST00000556269 907 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.15□□□□□ -1.59
NFKB1P19838 RPL23AP87-202ENST00000573039 466 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 MIR3910-1-201ENST00000580936 111 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.15□□□□□ -1.59
NFKB1P19838 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.15□□□□□ -1.59
NFKB1P19838 MIR6886-201ENST00000619864 61 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 FP236240.3-201ENST00000623061 327 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.15□□□□□ -1.59
NFKB1P19838 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.15□□□□□ -1.59
NFKB1P19838 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NFKB1P19838 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NFKB1P19838 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NFKB1P19838 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
NFKB1P19838 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.14□□□□□ -1.59
NFKB1P19838 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 MIR335-201ENST00000362173 94 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 SNORA51.1-201ENST00000363243 140 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 Y_RNA.274-201ENST00000364714 101 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 MIR223-201ENST00000385204 110 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 MIR628-201ENST00000385229 95 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 RNU6-130P-201ENST00000411112 103 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 PPP1R11P2-201ENST00000423543 382 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AC016712.1-201ENST00000431088 378 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AC090774.1-201ENST00000435925 246 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 RPEP5-201ENST00000441137 268 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 RN7SL214P-201ENST00000487317 265 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.14□□□□□ -1.59
NFKB1P19838 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.14□□□□□ -1.59
NFKB1P19838 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.14□□□□□ -1.59
NFKB1P19838 AC008958.1-201ENST00000511047 682 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 TRAV32-201ENST00000553993 340 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 CPDP1-201ENST00000579660 283 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.14□□□□□ -1.59
NFKB1P19838 AL158827.2-201ENST00000602494 330 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AL355877.2-201ENST00000603670 358 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AC010900.2-201ENST00000604508 210 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 BX005214.3-202ENST00000619809 325 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AL691447.3-201ENST00000635020 330 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 MIR4275-201ENST00000636486 87 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 AC073869.10-201ENST00000642016 354 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NFKB1P19838 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NFKB1P19838 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.14□□□□□ -1.59
NFKB1P19838 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
NFKB1P19838 AC100778.3-201ENST00000580060 1750 ntBASIC5.14□□□□□ -1.59
NFKB1P19838 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NFKB1P19838 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NFKB1P19838 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NFKB1P19838 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NFKB1P19838 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NFKB1P19838 Y_RNA.84-201ENST00000363011 104 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 RNU6-774P-201ENST00000363238 107 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 RNU6-1155P-201ENST00000363554 107 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
NFKB1P19838 RNU6-886P-201ENST00000384319 105 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 SNORD58.1-201ENST00000391313 66 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AL591034.2-201ENST00000402839 359 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 RNA5SP36-201ENST00000410197 133 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 RNU2-33P-201ENST00000410344 192 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AC104333.2-201ENST00000422630 192 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AL355433.1-201ENST00000422804 300 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 EIF4EP2-201ENST00000422816 654 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
NFKB1P19838 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.13□□□□□ -1.59
NFKB1P19838 MRPL48P1-201ENST00000445390 636 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 PRDX3P3-201ENST00000447765 522 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.13□□□□□ -1.59
NFKB1P19838 AL691482.1-201ENST00000453255 87 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.13□□□□□ -1.59
NFKB1P19838 MRPS33P2-201ENST00000507850 322 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 RNU6-914P-201ENST00000516749 109 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 SNRPGP16-201ENST00000533275 226 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.13□□□□□ -1.59
NFKB1P19838 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.13□□□□□ -1.59
NFKB1P19838 MIR548AC-201ENST00000585049 88 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AC012669.1-201ENST00000603209 283 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 MIR3976-201ENST00000606807 139 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 AL731566.2-201ENST00000618971 317 ntBASIC5.13□□□□□ -1.59
NFKB1P19838 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.13□□□□□ -1.59
NFKB1P19838 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
NFKB1P19838 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.13□□□□□ -1.59
NFKB1P19838 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NFKB1P19838 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NFKB1P19838 PHKBP1-201ENST00000450951 1951 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms