Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhga6Q91XY2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga6Q91XY2 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.99■■□□□ 1.27
Pcdhga6Q91XY2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga6Q91XY2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga6Q91XY2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga6Q91XY2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Gm45364-201ENSMUST00000210883 159 ntBASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga6Q91XY2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga6Q91XY2 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.96■■□□□ 1.27
Pcdhga6Q91XY2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhga6Q91XY2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhga6Q91XY2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.93■■□□□ 1.26
Pcdhga6Q91XY2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhga6Q91XY2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga6Q91XY2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga6Q91XY2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga6Q91XY2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhga6Q91XY2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhga6Q91XY2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.92■■□□□ 1.26
Pcdhga6Q91XY2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhga6Q91XY2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhga6Q91XY2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga6Q91XY2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Pcdhga6Q91XY2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhga6Q91XY2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Pcdhga6Q91XY2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhga6Q91XY2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga6Q91XY2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga6Q91XY2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga6Q91XY2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Pcdhga6Q91XY2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga6Q91XY2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhga6Q91XY2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhga6Q91XY2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga6Q91XY2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga6Q91XY2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga6Q91XY2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.86■■□□□ 1.25
Pcdhga6Q91XY2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhga6Q91XY2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga6Q91XY2 Gm5921-201ENSMUST00000075898 882 ntBASIC22.85■■□□□ 1.25
Pcdhga6Q91XY2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga6Q91XY2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga6Q91XY2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Amer2-203ENSMUST00000225247 2662 ntBASIC22.84■■□□□ 1.25
Pcdhga6Q91XY2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.83■■□□□ 1.25
Pcdhga6Q91XY2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhga6Q91XY2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhga6Q91XY2 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga6Q91XY2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga6Q91XY2 Gm15546-201ENSMUST00000122095 826 ntBASIC22.81■■□□□ 1.24
Pcdhga6Q91XY2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Pcdhga6Q91XY2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga6Q91XY2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga6Q91XY2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Pcdhga6Q91XY2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhga6Q91XY2 Gm10420-201ENSMUST00000121713 882 ntBASIC22.79■■□□□ 1.24
Pcdhga6Q91XY2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.79■■□□□ 1.24
Pcdhga6Q91XY2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.78■■□□□ 1.24
Pcdhga6Q91XY2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga6Q91XY2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga6Q91XY2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga6Q91XY2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga6Q91XY2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhga6Q91XY2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhga6Q91XY2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdhga6Q91XY2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhga6Q91XY2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhga6Q91XY2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhga6Q91XY2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.75■■□□□ 1.23
Pcdhga6Q91XY2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga6Q91XY2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 Gm37136-201ENSMUST00000194368 194 ntBASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms