Protein–RNA interactions for Protein: Q8R2C6

Vmn1r21, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r21Q8R2C6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r21Q8R2C6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r21Q8R2C6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Vmn1r21Q8R2C6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r21Q8R2C6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r21Q8R2C6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r21Q8R2C6 Gm30023-201ENSMUST00000197970 889 ntBASIC20.24■□□□□ 0.83
Vmn1r21Q8R2C6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r21Q8R2C6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r21Q8R2C6 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.24■□□□□ 0.83
Vmn1r21Q8R2C6 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.24■□□□□ 0.83
Vmn1r21Q8R2C6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r21Q8R2C6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r21Q8R2C6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r21Q8R2C6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Vmn1r21Q8R2C6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r21Q8R2C6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r21Q8R2C6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r21Q8R2C6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r21Q8R2C6 Particl-201ENSMUST00000205370 1560 ntBASIC20.21■□□□□ 0.83
Vmn1r21Q8R2C6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r21Q8R2C6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.21■□□□□ 0.83
Vmn1r21Q8R2C6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r21Q8R2C6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r21Q8R2C6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r21Q8R2C6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r21Q8R2C6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r21Q8R2C6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vmn1r21Q8R2C6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r21Q8R2C6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r21Q8R2C6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vmn1r21Q8R2C6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r21Q8R2C6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Vmn1r21Q8R2C6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r21Q8R2C6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r21Q8R2C6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r21Q8R2C6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r21Q8R2C6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r21Q8R2C6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vmn1r21Q8R2C6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vmn1r21Q8R2C6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r21Q8R2C6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r21Q8R2C6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r21Q8R2C6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r21Q8R2C6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r21Q8R2C6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r21Q8R2C6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r21Q8R2C6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r21Q8R2C6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vmn1r21Q8R2C6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r21Q8R2C6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r21Q8R2C6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r21Q8R2C6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r21Q8R2C6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.11■□□□□ 0.81
Vmn1r21Q8R2C6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r21Q8R2C6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r21Q8R2C6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r21Q8R2C6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r21Q8R2C6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r21Q8R2C6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r21Q8R2C6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.09■□□□□ 0.81
Vmn1r21Q8R2C6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r21Q8R2C6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r21Q8R2C6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Vmn1r21Q8R2C6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r21Q8R2C6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r21Q8R2C6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r21Q8R2C6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r21Q8R2C6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r21Q8R2C6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r21Q8R2C6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r21Q8R2C6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.05■□□□□ 0.8
Vmn1r21Q8R2C6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r21Q8R2C6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Vmn1r21Q8R2C6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r21Q8R2C6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.04■□□□□ 0.8
Vmn1r21Q8R2C6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Vmn1r21Q8R2C6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r21Q8R2C6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r21Q8R2C6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r21Q8R2C6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.03■□□□□ 0.8
Vmn1r21Q8R2C6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r21Q8R2C6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r21Q8R2C6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.02■□□□□ 0.8
Vmn1r21Q8R2C6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vmn1r21Q8R2C6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r21Q8R2C6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms