Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.95■□□□□ 0.62
Chd9Q8BYH8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd9Q8BYH8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd9Q8BYH8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd9Q8BYH8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd9Q8BYH8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chd9Q8BYH8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd9Q8BYH8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd9Q8BYH8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd9Q8BYH8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd9Q8BYH8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Chd9Q8BYH8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd9Q8BYH8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd9Q8BYH8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd9Q8BYH8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd9Q8BYH8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd9Q8BYH8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd9Q8BYH8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd9Q8BYH8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd9Q8BYH8 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.9■□□□□ 0.62
Chd9Q8BYH8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd9Q8BYH8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd9Q8BYH8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Chd9Q8BYH8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chd9Q8BYH8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd9Q8BYH8 Particl-201ENSMUST00000205370 1560 ntBASIC18.88■□□□□ 0.61
Chd9Q8BYH8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chd9Q8BYH8 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.88■□□□□ 0.61
Chd9Q8BYH8 Gm13238-201ENSMUST00000117655 780 ntBASIC18.88■□□□□ 0.61
Chd9Q8BYH8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.88■□□□□ 0.61
Chd9Q8BYH8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.88■□□□□ 0.61
Chd9Q8BYH8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chd9Q8BYH8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chd9Q8BYH8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd9Q8BYH8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd9Q8BYH8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd9Q8BYH8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd9Q8BYH8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd9Q8BYH8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd9Q8BYH8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd9Q8BYH8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd9Q8BYH8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.83■□□□□ 0.61
Chd9Q8BYH8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd9Q8BYH8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd9Q8BYH8 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.82■□□□□ 0.6
Chd9Q8BYH8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd9Q8BYH8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.81■□□□□ 0.6
Chd9Q8BYH8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd9Q8BYH8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Chd9Q8BYH8 Gm45364-201ENSMUST00000210883 159 ntBASIC18.8■□□□□ 0.6
Chd9Q8BYH8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Chd9Q8BYH8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd9Q8BYH8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd9Q8BYH8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.79■□□□□ 0.6
Chd9Q8BYH8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd9Q8BYH8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd9Q8BYH8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd9Q8BYH8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd9Q8BYH8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Chd9Q8BYH8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd9Q8BYH8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd9Q8BYH8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd9Q8BYH8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd9Q8BYH8 Gm45444-201ENSMUST00000211394 898 ntBASIC18.75■□□□□ 0.59
Chd9Q8BYH8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd9Q8BYH8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.75■□□□□ 0.59
Chd9Q8BYH8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.74■□□□□ 0.59
Chd9Q8BYH8 Gm30023-201ENSMUST00000197970 889 ntBASIC18.74■□□□□ 0.59
Chd9Q8BYH8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd9Q8BYH8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.72■□□□□ 0.59
Chd9Q8BYH8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd9Q8BYH8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.72■□□□□ 0.59
Chd9Q8BYH8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.72■□□□□ 0.59
Chd9Q8BYH8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms