Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smco3Q8BQM7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smco3Q8BQM7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smco3Q8BQM7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smco3Q8BQM7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smco3Q8BQM7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 Gm8109-201ENSMUST00000194076 746 ntBASIC19■□□□□ 0.63
Smco3Q8BQM7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smco3Q8BQM7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smco3Q8BQM7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smco3Q8BQM7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smco3Q8BQM7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smco3Q8BQM7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smco3Q8BQM7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smco3Q8BQM7 Gm26115-201ENSMUST00000175605 87 ntBASIC18.97■□□□□ 0.63
Smco3Q8BQM7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.97■□□□□ 0.63
Smco3Q8BQM7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smco3Q8BQM7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smco3Q8BQM7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smco3Q8BQM7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smco3Q8BQM7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.96■□□□□ 0.63
Smco3Q8BQM7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smco3Q8BQM7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smco3Q8BQM7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smco3Q8BQM7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smco3Q8BQM7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smco3Q8BQM7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Smco3Q8BQM7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smco3Q8BQM7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smco3Q8BQM7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smco3Q8BQM7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smco3Q8BQM7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smco3Q8BQM7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smco3Q8BQM7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco3Q8BQM7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco3Q8BQM7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco3Q8BQM7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco3Q8BQM7 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.92■□□□□ 0.62
Smco3Q8BQM7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco3Q8BQM7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smco3Q8BQM7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.91■□□□□ 0.62
Smco3Q8BQM7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smco3Q8BQM7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smco3Q8BQM7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smco3Q8BQM7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smco3Q8BQM7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smco3Q8BQM7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smco3Q8BQM7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smco3Q8BQM7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smco3Q8BQM7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smco3Q8BQM7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smco3Q8BQM7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smco3Q8BQM7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smco3Q8BQM7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.87■□□□□ 0.61
Smco3Q8BQM7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smco3Q8BQM7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco3Q8BQM7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco3Q8BQM7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco3Q8BQM7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco3Q8BQM7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco3Q8BQM7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smco3Q8BQM7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Smco3Q8BQM7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco3Q8BQM7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smco3Q8BQM7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.84■□□□□ 0.61
Smco3Q8BQM7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smco3Q8BQM7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smco3Q8BQM7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smco3Q8BQM7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco3Q8BQM7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms