Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh20Q8BIZ0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Pcdh20Q8BIZ0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh20Q8BIZ0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh20Q8BIZ0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh20Q8BIZ0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Pcdh20Q8BIZ0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.46■■□□□ 1.19
Pcdh20Q8BIZ0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh20Q8BIZ0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh20Q8BIZ0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdh20Q8BIZ0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdh20Q8BIZ0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdh20Q8BIZ0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcdh20Q8BIZ0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh20Q8BIZ0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh20Q8BIZ0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.43■■□□□ 1.18
Pcdh20Q8BIZ0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh20Q8BIZ0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh20Q8BIZ0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh20Q8BIZ0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh20Q8BIZ0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh20Q8BIZ0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdh20Q8BIZ0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdh20Q8BIZ0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Pcdh20Q8BIZ0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Pcdh20Q8BIZ0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh20Q8BIZ0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh20Q8BIZ0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh20Q8BIZ0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh20Q8BIZ0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh20Q8BIZ0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pcdh20Q8BIZ0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdh20Q8BIZ0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdh20Q8BIZ0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh20Q8BIZ0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdh20Q8BIZ0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdh20Q8BIZ0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdh20Q8BIZ0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh20Q8BIZ0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh20Q8BIZ0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh20Q8BIZ0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pcdh20Q8BIZ0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh20Q8BIZ0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh20Q8BIZ0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.34■■□□□ 1.17
Pcdh20Q8BIZ0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh20Q8BIZ0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh20Q8BIZ0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh20Q8BIZ0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdh20Q8BIZ0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh20Q8BIZ0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdh20Q8BIZ0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh20Q8BIZ0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh20Q8BIZ0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh20Q8BIZ0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdh20Q8BIZ0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdh20Q8BIZ0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdh20Q8BIZ0 Gm7432-201ENSMUST00000210343 879 ntBASIC22.29■■□□□ 1.16
Pcdh20Q8BIZ0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.29■■□□□ 1.16
Pcdh20Q8BIZ0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh20Q8BIZ0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh20Q8BIZ0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh20Q8BIZ0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh20Q8BIZ0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.28■■□□□ 1.16
Pcdh20Q8BIZ0 Gm30023-201ENSMUST00000197970 889 ntBASIC22.28■■□□□ 1.16
Pcdh20Q8BIZ0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh20Q8BIZ0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh20Q8BIZ0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh20Q8BIZ0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdh20Q8BIZ0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdh20Q8BIZ0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Pcdh20Q8BIZ0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh20Q8BIZ0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh20Q8BIZ0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh20Q8BIZ0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
Pcdh20Q8BIZ0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh20Q8BIZ0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh20Q8BIZ0 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.24■■□□□ 1.15
Pcdh20Q8BIZ0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh20Q8BIZ0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms