Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim36Q80WG7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim36Q80WG7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim36Q80WG7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim36Q80WG7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Trim36Q80WG7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim36Q80WG7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.22■■□□□ 1.15
Trim36Q80WG7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.22■■□□□ 1.15
Trim36Q80WG7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim36Q80WG7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Trim36Q80WG7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.21■■□□□ 1.15
Trim36Q80WG7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim36Q80WG7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim36Q80WG7 Nkain2-201ENSMUST00000092602 558 ntBASIC22.2■■□□□ 1.14
Trim36Q80WG7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim36Q80WG7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim36Q80WG7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.19■■□□□ 1.14
Trim36Q80WG7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim36Q80WG7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim36Q80WG7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim36Q80WG7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim36Q80WG7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim36Q80WG7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim36Q80WG7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Trim36Q80WG7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim36Q80WG7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim36Q80WG7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim36Q80WG7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim36Q80WG7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim36Q80WG7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim36Q80WG7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim36Q80WG7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trim36Q80WG7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim36Q80WG7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Trim36Q80WG7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim36Q80WG7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim36Q80WG7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim36Q80WG7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim36Q80WG7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim36Q80WG7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.13■■□□□ 1.13
Trim36Q80WG7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.12■■□□□ 1.13
Trim36Q80WG7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim36Q80WG7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Trim36Q80WG7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
Trim36Q80WG7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim36Q80WG7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trim36Q80WG7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim36Q80WG7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim36Q80WG7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trim36Q80WG7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim36Q80WG7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim36Q80WG7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim36Q80WG7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim36Q80WG7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim36Q80WG7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim36Q80WG7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Trim36Q80WG7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim36Q80WG7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
Trim36Q80WG7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim36Q80WG7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim36Q80WG7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trim36Q80WG7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim36Q80WG7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim36Q80WG7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.06■■□□□ 1.12
Trim36Q80WG7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim36Q80WG7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim36Q80WG7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim36Q80WG7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim36Q80WG7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim36Q80WG7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim36Q80WG7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim36Q80WG7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim36Q80WG7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Trim36Q80WG7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim36Q80WG7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim36Q80WG7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim36Q80WG7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim36Q80WG7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim36Q80WG7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
Trim36Q80WG7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.01■■□□□ 1.11
Trim36Q80WG7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim36Q80WG7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22■■□□□ 1.11
Trim36Q80WG7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trim36Q80WG7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim36Q80WG7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim36Q80WG7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim36Q80WG7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 122.7 ms