Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox17Q61473 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox17Q61473 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox17Q61473 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox17Q61473 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox17Q61473 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox17Q61473 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.84■■□□□ 1.09
Sox17Q61473 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.84■■□□□ 1.09
Sox17Q61473 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox17Q61473 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox17Q61473 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox17Q61473 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox17Q61473 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Sox17Q61473 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sox17Q61473 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox17Q61473 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.82■■□□□ 1.08
Sox17Q61473 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Sox17Q61473 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox17Q61473 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox17Q61473 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox17Q61473 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox17Q61473 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox17Q61473 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Sox17Q61473 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox17Q61473 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox17Q61473 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sox17Q61473 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sox17Q61473 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox17Q61473 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox17Q61473 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Sox17Q61473 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Sox17Q61473 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox17Q61473 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox17Q61473 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox17Q61473 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox17Q61473 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sox17Q61473 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Sox17Q61473 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox17Q61473 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Sox17Q61473 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox17Q61473 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Sox17Q61473 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.73■■□□□ 1.07
Sox17Q61473 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox17Q61473 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Sox17Q61473 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sox17Q61473 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sox17Q61473 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox17Q61473 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.7■■□□□ 1.06
Sox17Q61473 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sox17Q61473 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Sox17Q61473 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox17Q61473 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Sox17Q61473 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox17Q61473 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox17Q61473 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Sox17Q61473 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.68■■□□□ 1.06
Sox17Q61473 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox17Q61473 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sox17Q61473 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox17Q61473 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox17Q61473 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.67■■□□□ 1.06
Sox17Q61473 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox17Q61473 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.66■■□□□ 1.06
Sox17Q61473 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sox17Q61473 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox17Q61473 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox17Q61473 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox17Q61473 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox17Q61473 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox17Q61473 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox17Q61473 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox17Q61473 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox17Q61473 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Sox17Q61473 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox17Q61473 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox17Q61473 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.64■■□□□ 1.05
Sox17Q61473 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.64■■□□□ 1.05
Sox17Q61473 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Sox17Q61473 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox17Q61473 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox17Q61473 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox17Q61473 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.63■■□□□ 1.05
Sox17Q61473 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox17Q61473 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox17Q61473 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox17Q61473 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sox17Q61473 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox17Q61473 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox17Q61473 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox17Q61473 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox17Q61473 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Sox17Q61473 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Sox17Q61473 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox17Q61473 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms