Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 tA(AGC)K1tA(AGC)K1 73 nt6.55□□□□□ -1.36
VPS28Q02767 tA(AGC)K2tA(AGC)K2 73 nt6.55□□□□□ -1.36
VPS28Q02767 tA(AGC)LtA(AGC)L 73 nt6.55□□□□□ -1.36
VPS28Q02767 tA(AGC)M1tA(AGC)M1 73 nt6.55□□□□□ -1.36
VPS28Q02767 tA(AGC)M2tA(AGC)M2 73 nt6.55□□□□□ -1.36
VPS28Q02767 tA(AGC)PtA(AGC)P 73 nt6.55□□□□□ -1.36
VPS28Q02767 THI73YLR004C 1572 nt6.55□□□□□ -1.36
VPS28Q02767 STP3YLR375W 1032 nt6.54□□□□□ -1.36
VPS28Q02767 ADH6YMR318C 1083 nt6.54□□□□□ -1.36
VPS28Q02767 ERO1YML130C 1692 nt6.53□□□□□ -1.36
VPS28Q02767 CAK1YFL029C 1107 nt6.53□□□□□ -1.36
VPS28Q02767 SNA3YJL151C 402 nt6.53□□□□□ -1.36
VPS28Q02767 PGC1YPL206C 966 nt6.53□□□□□ -1.36
VPS28Q02767 IPL1YPL209C 1104 nt6.53□□□□□ -1.36
VPS28Q02767 YDR306CYDR306C 1437 nt6.52□□□□□ -1.37
VPS28Q02767 YMR166CYMR166C 1107 nt6.52□□□□□ -1.37
VPS28Q02767 MAL31YBR298C 1845 nt6.51□□□□□ -1.37
VPS28Q02767 GNA1YFL017C 480 nt6.51□□□□□ -1.37
VPS28Q02767 YER152W-AYER152W-A 567 nt6.5□□□□□ -1.37
VPS28Q02767 RCF2YNR018W 675 nt6.5□□□□□ -1.37
VPS28Q02767 YBL113CYBL113C 2379 nt6.5□□□□□ -1.37
VPS28Q02767 APT1YML022W 564 nt6.49□□□□□ -1.37
VPS28Q02767 YKR018CYKR018C 2178 nt6.49□□□□□ -1.37
VPS28Q02767 CMK2YOL016C 1344 nt6.49□□□□□ -1.37
VPS28Q02767 PRE10YOR362C 867 nt6.48□□□□□ -1.37
VPS28Q02767 AOS1YPR180W 1044 nt6.48□□□□□ -1.37
VPS28Q02767 LEO1YOR123C 1395 nt6.47□□□□□ -1.37
VPS28Q02767 ADH7YCR105W 1086 nt6.47□□□□□ -1.37
VPS28Q02767 HAM1YJR069C 594 nt6.47□□□□□ -1.37
VPS28Q02767 YOR041CYOR041C 432 nt6.47□□□□□ -1.37
VPS28Q02767 TIM50YPL063W 1431 nt6.47□□□□□ -1.37
VPS28Q02767 GUT1YHL032C 2130 nt6.47□□□□□ -1.37
VPS28Q02767 YEL023CYEL023C 2049 nt6.47□□□□□ -1.37
VPS28Q02767 EDC3YEL015W 1656 nt6.46□□□□□ -1.37
VPS28Q02767 RPL12BYDR418W 498 nt6.46□□□□□ -1.38
VPS28Q02767 YPT31YER031C 672 nt6.46□□□□□ -1.38
VPS28Q02767 RRT14YIL127C 621 nt6.46□□□□□ -1.38
VPS28Q02767 BAP3YDR046C 1815 nt6.46□□□□□ -1.38
VPS28Q02767 ICL2YPR006C 1728 nt6.45□□□□□ -1.38
VPS28Q02767 STF1YDL130W-A 261 nt6.45□□□□□ -1.38
VPS28Q02767 DST1YGL043W 930 nt6.45□□□□□ -1.38
VPS28Q02767 YBR232CYBR232C 360 nt6.45□□□□□ -1.38
VPS28Q02767 SEC24YIL109C 2781 nt6.45□□□□□ -1.38
VPS28Q02767 DCR2YLR361C 1737 nt6.45□□□□□ -1.38
VPS28Q02767 PRB1YEL060C 1908 nt6.44□□□□□ -1.38
VPS28Q02767 TCB1YOR086C 3561 nt6.44□□□□□ -1.38
VPS28Q02767 TRR1YDR353W 960 nt6.44□□□□□ -1.38
VPS28Q02767 YER137CYER137C 447 nt6.44□□□□□ -1.38
VPS28Q02767 SNF7YLR025W 723 nt6.44□□□□□ -1.38
VPS28Q02767 VPS65YLR322W 315 nt6.44□□□□□ -1.38
VPS28Q02767 BNA3YJL060W 1335 nt6.44□□□□□ -1.38
VPS28Q02767 ARG7YMR062C 1326 nt6.44□□□□□ -1.38
VPS28Q02767 CDC23YHR166C 1881 nt6.43□□□□□ -1.38
VPS28Q02767 SER2YGR208W 930 nt6.43□□□□□ -1.38
VPS28Q02767 PAU15YIR041W 375 nt6.43□□□□□ -1.38
VPS28Q02767 YJL043WYJL043W 774 nt6.43□□□□□ -1.38
VPS28Q02767 PET10YKR046C 852 nt6.43□□□□□ -1.38
VPS28Q02767 MNN9YPL050C 1188 nt6.43□□□□□ -1.38
VPS28Q02767 JHD1YER051W 1479 nt6.42□□□□□ -1.38
VPS28Q02767 GTS1YGL181W 1191 nt6.42□□□□□ -1.38
VPS28Q02767 YGR210CYGR210C 1236 nt6.42□□□□□ -1.38
VPS28Q02767 YHR033WYHR033W 1272 nt6.42□□□□□ -1.38
VPS28Q02767 LSP1YPL004C 1026 nt6.42□□□□□ -1.38
VPS28Q02767 YCR061WYCR061W 1896 nt6.42□□□□□ -1.38
VPS28Q02767 TPI1YDR050C 747 nt6.41□□□□□ -1.38
VPS28Q02767 RAD51YER095W 1203 nt6.41□□□□□ -1.38
VPS28Q02767 NAP1YKR048C 1254 nt6.41□□□□□ -1.38
VPS28Q02767 YPL108WYPL108W 507 nt6.41□□□□□ -1.38
VPS28Q02767 HNM1YGL077C 1692 nt6.41□□□□□ -1.38
VPS28Q02767 PPS1YBR276C 2424 nt6.4□□□□□ -1.38
VPS28Q02767 TOD6YBL054W 1578 nt6.4□□□□□ -1.38
VPS28Q02767 HTS1YPR033C 1641 nt6.4□□□□□ -1.38
VPS28Q02767 YCR025CYCR025C 411 nt6.4□□□□□ -1.38
VPS28Q02767 PMU1YKL128C 888 nt6.4□□□□□ -1.38
VPS28Q02767 RMD8YFR048W 1989 nt6.4□□□□□ -1.39
VPS28Q02767 YDR215CYDR215C 414 nt6.39□□□□□ -1.39
VPS28Q02767 CPR2YHR057C 618 nt6.39□□□□□ -1.39
VPS28Q02767 CKI1YLR133W 1749 nt6.39□□□□□ -1.39
VPS28Q02767 FLC2YAL053W 2352 nt6.38□□□□□ -1.39
VPS28Q02767 CAR2YLR438W 1275 nt6.38□□□□□ -1.39
VPS28Q02767 HEL1YKR017C 1656 nt6.38□□□□□ -1.39
VPS28Q02767 YJL045WYJL045W 1905 nt6.38□□□□□ -1.39
VPS28Q02767 ACO1YLR304C 2337 nt6.37□□□□□ -1.39
VPS28Q02767 ERV25YML012W 636 nt6.37□□□□□ -1.39
VPS28Q02767 BXI1YNL305C 894 nt6.37□□□□□ -1.39
VPS28Q02767 RTC2YBR147W 891 nt6.37□□□□□ -1.39
VPS28Q02767 SSC1YJR045C 1965 nt6.37□□□□□ -1.39
VPS28Q02767 CAN1YEL063C 1773 nt6.36□□□□□ -1.39
VPS28Q02767 AGP2YBR132C 1791 nt6.36□□□□□ -1.39
VPS28Q02767 MSS51YLR203C 1311 nt6.36□□□□□ -1.39
VPS28Q02767 TGA1tA(UGC)A 73 nt6.36□□□□□ -1.39
VPS28Q02767 tA(UGC)EtA(UGC)E 73 nt6.36□□□□□ -1.39
VPS28Q02767 tA(UGC)GtA(UGC)G 73 nt6.36□□□□□ -1.39
VPS28Q02767 tA(UGC)LtA(UGC)L 73 nt6.36□□□□□ -1.39
VPS28Q02767 tA(UGC)OtA(UGC)O 73 nt6.36□□□□□ -1.39
VPS28Q02767 tS(GCU)LtS(GCU)L 80 nt6.36□□□□□ -1.39
VPS28Q02767 VTS1YOR359W 1572 nt6.35□□□□□ -1.39
VPS28Q02767 YOR389WYOR389W 1875 nt6.35□□□□□ -1.39
VPS28Q02767 YGR068W-AYGR068W-A 96 nt6.35□□□□□ -1.39
VPS28Q02767 ENB1YOL158C 1821 nt6.34□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms