Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Stra8P70278 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Stra8P70278 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Stra8P70278 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Stra8P70278 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Stra8P70278 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Stra8P70278 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Stra8P70278 Il17rd-202ENSMUST00000223942 2186 ntBASIC31.86■■■□□ 2.69
Stra8P70278 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.86■■■□□ 2.69
Stra8P70278 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Stra8P70278 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Stra8P70278 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Stra8P70278 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC31.86■■■□□ 2.69
Stra8P70278 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Stra8P70278 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Stra8P70278 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Stra8P70278 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Stra8P70278 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Stra8P70278 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Stra8P70278 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.84■■■□□ 2.69
Stra8P70278 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
Stra8P70278 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Stra8P70278 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Stra8P70278 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Stra8P70278 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Stra8P70278 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.83■■■□□ 2.69
Stra8P70278 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Stra8P70278 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Stra8P70278 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Stra8P70278 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Stra8P70278 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Stra8P70278 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Stra8P70278 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Stra8P70278 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
Stra8P70278 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Stra8P70278 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.78■■■□□ 2.68
Stra8P70278 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.77■■■□□ 2.68
Stra8P70278 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Stra8P70278 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Stra8P70278 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Stra8P70278 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC31.76■■■□□ 2.67
Stra8P70278 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Stra8P70278 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Stra8P70278 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Stra8P70278 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
Stra8P70278 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Stra8P70278 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Stra8P70278 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Stra8P70278 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.72■■■□□ 2.67
Stra8P70278 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Stra8P70278 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
Stra8P70278 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Stra8P70278 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Stra8P70278 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Stra8P70278 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Stra8P70278 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Stra8P70278 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Stra8P70278 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Stra8P70278 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Stra8P70278 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Stra8P70278 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Stra8P70278 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Stra8P70278 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.67■■■□□ 2.66
Stra8P70278 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Stra8P70278 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Stra8P70278 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Stra8P70278 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Stra8P70278 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Stra8P70278 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Stra8P70278 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Stra8P70278 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Stra8P70278 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Stra8P70278 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Stra8P70278 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
Stra8P70278 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Stra8P70278 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Stra8P70278 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Stra8P70278 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Stra8P70278 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Stra8P70278 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
Stra8P70278 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Stra8P70278 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Stra8P70278 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
Stra8P70278 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Stra8P70278 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Stra8P70278 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Stra8P70278 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Stra8P70278 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.57■■■□□ 2.64
Stra8P70278 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC31.56■■■□□ 2.64
Stra8P70278 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Stra8P70278 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Stra8P70278 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Stra8P70278 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Stra8P70278 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Stra8P70278 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Stra8P70278 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Stra8P70278 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Stra8P70278 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Stra8P70278 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Stra8P70278 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms