Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab5cP35278 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Rab5cP35278 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab5cP35278 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab5cP35278 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rab5cP35278 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab5cP35278 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab5cP35278 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.94■□□□□ 0.62
Rab5cP35278 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab5cP35278 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab5cP35278 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Rab5cP35278 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab5cP35278 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab5cP35278 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab5cP35278 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab5cP35278 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rab5cP35278 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab5cP35278 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab5cP35278 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab5cP35278 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.9■□□□□ 0.62
Rab5cP35278 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab5cP35278 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rab5cP35278 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab5cP35278 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab5cP35278 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rab5cP35278 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab5cP35278 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab5cP35278 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab5cP35278 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab5cP35278 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab5cP35278 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Rab5cP35278 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab5cP35278 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rab5cP35278 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab5cP35278 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab5cP35278 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab5cP35278 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab5cP35278 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab5cP35278 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab5cP35278 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab5cP35278 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rab5cP35278 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab5cP35278 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab5cP35278 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Rab5cP35278 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab5cP35278 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab5cP35278 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.84■□□□□ 0.61
Rab5cP35278 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab5cP35278 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab5cP35278 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rab5cP35278 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab5cP35278 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab5cP35278 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab5cP35278 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab5cP35278 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab5cP35278 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.82■□□□□ 0.6
Rab5cP35278 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab5cP35278 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab5cP35278 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab5cP35278 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab5cP35278 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab5cP35278 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab5cP35278 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab5cP35278 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rab5cP35278 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab5cP35278 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab5cP35278 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rab5cP35278 Gm25262-201ENSMUST00000174934 133 ntBASIC18.79■□□□□ 0.6
Rab5cP35278 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.79■□□□□ 0.6
Rab5cP35278 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.79■□□□□ 0.6
Rab5cP35278 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab5cP35278 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab5cP35278 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab5cP35278 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab5cP35278 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rab5cP35278 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab5cP35278 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.77■□□□□ 0.6
Rab5cP35278 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.77■□□□□ 0.6
Rab5cP35278 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab5cP35278 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms