Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pax1P09084 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Pax1P09084 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pax1P09084 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pax1P09084 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pax1P09084 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pax1P09084 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pax1P09084 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pax1P09084 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pax1P09084 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pax1P09084 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pax1P09084 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pax1P09084 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pax1P09084 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pax1P09084 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pax1P09084 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pax1P09084 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pax1P09084 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pax1P09084 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pax1P09084 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pax1P09084 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pax1P09084 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pax1P09084 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pax1P09084 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pax1P09084 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pax1P09084 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pax1P09084 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pax1P09084 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pax1P09084 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pax1P09084 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pax1P09084 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pax1P09084 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pax1P09084 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pax1P09084 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pax1P09084 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pax1P09084 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pax1P09084 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.73■□□□□ 0.59
Pax1P09084 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pax1P09084 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.72■□□□□ 0.59
Pax1P09084 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.72■□□□□ 0.59
Pax1P09084 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Pax1P09084 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.72■□□□□ 0.59
Pax1P09084 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pax1P09084 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.71■□□□□ 0.59
Pax1P09084 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pax1P09084 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pax1P09084 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pax1P09084 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.71■□□□□ 0.58
Pax1P09084 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pax1P09084 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.7■□□□□ 0.58
Pax1P09084 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pax1P09084 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pax1P09084 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Pax1P09084 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pax1P09084 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pax1P09084 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pax1P09084 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pax1P09084 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pax1P09084 Particl-201ENSMUST00000205370 1560 ntBASIC18.68■□□□□ 0.58
Pax1P09084 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pax1P09084 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pax1P09084 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.67■□□□□ 0.58
Pax1P09084 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pax1P09084 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pax1P09084 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.66■□□□□ 0.58
Pax1P09084 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pax1P09084 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pax1P09084 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pax1P09084 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pax1P09084 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pax1P09084 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.66■□□□□ 0.58
Pax1P09084 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pax1P09084 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pax1P09084 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pax1P09084 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pax1P09084 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pax1P09084 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pax1P09084 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pax1P09084 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pax1P09084 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pax1P09084 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pax1P09084 Zfp131-205ENSMUST00000223812 663 ntBASIC18.64■□□□□ 0.57
Pax1P09084 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pax1P09084 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pax1P09084 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pax1P09084 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pax1P09084 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pax1P09084 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pax1P09084 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pax1P09084 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pax1P09084 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pax1P09084 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pax1P09084 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms