Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Slc28a2O88627 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Slc28a2O88627 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc28a2O88627 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc28a2O88627 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Slc28a2O88627 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Slc28a2O88627 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc28a2O88627 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc28a2O88627 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Slc28a2O88627 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc28a2O88627 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Slc28a2O88627 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc28a2O88627 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc28a2O88627 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc28a2O88627 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc28a2O88627 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc28a2O88627 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc28a2O88627 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc28a2O88627 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc28a2O88627 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc28a2O88627 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.41■□□□□ 0.86
Slc28a2O88627 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc28a2O88627 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.4■□□□□ 0.86
Slc28a2O88627 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc28a2O88627 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc28a2O88627 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc28a2O88627 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc28a2O88627 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.39■□□□□ 0.86
Slc28a2O88627 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Slc28a2O88627 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc28a2O88627 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc28a2O88627 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc28a2O88627 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Slc28a2O88627 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc28a2O88627 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc28a2O88627 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc28a2O88627 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.35■□□□□ 0.85
Slc28a2O88627 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc28a2O88627 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc28a2O88627 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.35■□□□□ 0.85
Slc28a2O88627 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc28a2O88627 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc28a2O88627 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc28a2O88627 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc28a2O88627 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc28a2O88627 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc28a2O88627 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc28a2O88627 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc28a2O88627 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc28a2O88627 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc28a2O88627 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc28a2O88627 Gm30023-201ENSMUST00000197970 889 ntBASIC20.33■□□□□ 0.85
Slc28a2O88627 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.33■□□□□ 0.85
Slc28a2O88627 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc28a2O88627 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc28a2O88627 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc28a2O88627 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc28a2O88627 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc28a2O88627 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Slc28a2O88627 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc28a2O88627 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc28a2O88627 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc28a2O88627 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc28a2O88627 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc28a2O88627 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slc28a2O88627 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc28a2O88627 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc28a2O88627 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc28a2O88627 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc28a2O88627 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc28a2O88627 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc28a2O88627 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc28a2O88627 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc28a2O88627 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc28a2O88627 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Slc28a2O88627 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Slc28a2O88627 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc28a2O88627 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc28a2O88627 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.27■□□□□ 0.84
Slc28a2O88627 Nkain2-201ENSMUST00000092602 558 ntBASIC20.27■□□□□ 0.84
Slc28a2O88627 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc28a2O88627 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc28a2O88627 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc28a2O88627 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc28a2O88627 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Slc28a2O88627 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Slc28a2O88627 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc28a2O88627 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc28a2O88627 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc28a2O88627 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc28a2O88627 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc28a2O88627 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc28a2O88627 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms