Protein–RNA interactions for Protein: J3QQ23

Gm21310, Predicted gene, 21310, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21310J3QQ23 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm21310J3QQ23 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm21310J3QQ23 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm21310J3QQ23 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm21310J3QQ23 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm21310J3QQ23 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21310J3QQ23 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21310J3QQ23 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21310J3QQ23 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.32■□□□□ 0.52
Gm21310J3QQ23 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21310J3QQ23 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21310J3QQ23 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21310J3QQ23 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21310J3QQ23 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21310J3QQ23 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21310J3QQ23 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm21310J3QQ23 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm21310J3QQ23 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21310J3QQ23 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21310J3QQ23 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21310J3QQ23 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm21310J3QQ23 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21310J3QQ23 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21310J3QQ23 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21310J3QQ23 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21310J3QQ23 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21310J3QQ23 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm21310J3QQ23 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21310J3QQ23 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm21310J3QQ23 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21310J3QQ23 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gm21310J3QQ23 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21310J3QQ23 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21310J3QQ23 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21310J3QQ23 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21310J3QQ23 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm21310J3QQ23 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gm21310J3QQ23 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21310J3QQ23 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm21310J3QQ23 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21310J3QQ23 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21310J3QQ23 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21310J3QQ23 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21310J3QQ23 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21310J3QQ23 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21310J3QQ23 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21310J3QQ23 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm21310J3QQ23 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21310J3QQ23 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.5
Gm21310J3QQ23 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm21310J3QQ23 Gm26115-201ENSMUST00000175605 87 ntBASIC18.2■□□□□ 0.5
Gm21310J3QQ23 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm21310J3QQ23 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm21310J3QQ23 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm21310J3QQ23 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21310J3QQ23 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21310J3QQ23 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21310J3QQ23 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21310J3QQ23 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21310J3QQ23 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21310J3QQ23 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21310J3QQ23 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21310J3QQ23 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21310J3QQ23 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21310J3QQ23 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.17■□□□□ 0.5
Gm21310J3QQ23 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21310J3QQ23 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21310J3QQ23 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21310J3QQ23 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21310J3QQ23 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm21310J3QQ23 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm21310J3QQ23 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms