Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp27D3YV89 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp27D3YV89 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp27D3YV89 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.43■□□□□ 0.7
Mmp27D3YV89 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Mmp27D3YV89 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp27D3YV89 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp27D3YV89 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp27D3YV89 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp27D3YV89 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.43■□□□□ 0.7
Mmp27D3YV89 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp27D3YV89 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp27D3YV89 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Mmp27D3YV89 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp27D3YV89 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp27D3YV89 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.42■□□□□ 0.7
Mmp27D3YV89 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp27D3YV89 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp27D3YV89 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp27D3YV89 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Mmp27D3YV89 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Mmp27D3YV89 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp27D3YV89 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp27D3YV89 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Mmp27D3YV89 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Mmp27D3YV89 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp27D3YV89 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp27D3YV89 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.39■□□□□ 0.69
Mmp27D3YV89 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp27D3YV89 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp27D3YV89 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp27D3YV89 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Mmp27D3YV89 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp27D3YV89 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp27D3YV89 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Mmp27D3YV89 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp27D3YV89 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp27D3YV89 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Mmp27D3YV89 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp27D3YV89 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp27D3YV89 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp27D3YV89 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.35■□□□□ 0.69
Mmp27D3YV89 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Mmp27D3YV89 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.34■□□□□ 0.69
Mmp27D3YV89 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp27D3YV89 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp27D3YV89 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp27D3YV89 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp27D3YV89 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp27D3YV89 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Mmp27D3YV89 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp27D3YV89 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp27D3YV89 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mmp27D3YV89 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp27D3YV89 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.32■□□□□ 0.68
Mmp27D3YV89 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp27D3YV89 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Mmp27D3YV89 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp27D3YV89 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp27D3YV89 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp27D3YV89 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp27D3YV89 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.29■□□□□ 0.68
Mmp27D3YV89 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Mmp27D3YV89 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Mmp27D3YV89 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp27D3YV89 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp27D3YV89 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp27D3YV89 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp27D3YV89 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.27■□□□□ 0.67
Mmp27D3YV89 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp27D3YV89 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp27D3YV89 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp27D3YV89 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp27D3YV89 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms