Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Otud4B2RRE7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Otud4B2RRE7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Otud4B2RRE7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.82■■□□□ 1.08
Otud4B2RRE7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Otud4B2RRE7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Otud4B2RRE7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Otud4B2RRE7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Otud4B2RRE7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Otud4B2RRE7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Otud4B2RRE7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Otud4B2RRE7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Otud4B2RRE7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Otud4B2RRE7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Otud4B2RRE7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Otud4B2RRE7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Otud4B2RRE7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Otud4B2RRE7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Otud4B2RRE7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Otud4B2RRE7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Otud4B2RRE7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.75■■□□□ 1.07
Otud4B2RRE7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.75■■□□□ 1.07
Otud4B2RRE7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
Otud4B2RRE7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Otud4B2RRE7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Otud4B2RRE7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Otud4B2RRE7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Otud4B2RRE7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Otud4B2RRE7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Otud4B2RRE7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
Otud4B2RRE7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Otud4B2RRE7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Otud4B2RRE7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Otud4B2RRE7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Otud4B2RRE7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Otud4B2RRE7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Otud4B2RRE7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Otud4B2RRE7 Mir6538-201ENSMUST00000183713 110 ntBASIC21.72■■□□□ 1.07
Otud4B2RRE7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.72■■□□□ 1.07
Otud4B2RRE7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Otud4B2RRE7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Otud4B2RRE7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Otud4B2RRE7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Otud4B2RRE7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.7■■□□□ 1.06
Otud4B2RRE7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.7■■□□□ 1.06
Otud4B2RRE7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Otud4B2RRE7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.7■■□□□ 1.06
Otud4B2RRE7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Otud4B2RRE7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Otud4B2RRE7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.69■■□□□ 1.06
Otud4B2RRE7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Otud4B2RRE7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Otud4B2RRE7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.69■■□□□ 1.06
Otud4B2RRE7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Otud4B2RRE7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Otud4B2RRE7 Gm11175-201ENSMUST00000116172 543 ntBASIC21.68■■□□□ 1.06
Otud4B2RRE7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Otud4B2RRE7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Otud4B2RRE7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Otud4B2RRE7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Otud4B2RRE7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Otud4B2RRE7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Otud4B2RRE7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.67■■□□□ 1.06
Otud4B2RRE7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Otud4B2RRE7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Otud4B2RRE7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.67■■□□□ 1.06
Otud4B2RRE7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Otud4B2RRE7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Otud4B2RRE7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Otud4B2RRE7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Otud4B2RRE7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Otud4B2RRE7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Otud4B2RRE7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Otud4B2RRE7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Otud4B2RRE7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Otud4B2RRE7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Otud4B2RRE7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Otud4B2RRE7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Otud4B2RRE7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Otud4B2RRE7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.61■■□□□ 1.05
Otud4B2RRE7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Otud4B2RRE7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.61■■□□□ 1.05
Otud4B2RRE7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Otud4B2RRE7 Particl-201ENSMUST00000205370 1560 ntBASIC21.61■■□□□ 1.05
Otud4B2RRE7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Otud4B2RRE7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.6■■□□□ 1.05
Otud4B2RRE7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.6■■□□□ 1.05
Otud4B2RRE7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Otud4B2RRE7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Otud4B2RRE7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Otud4B2RRE7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Otud4B2RRE7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Otud4B2RRE7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.58■■□□□ 1.04
Otud4B2RRE7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms